Detailed information NTG0189151

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BA953_RS08030
• Genome accession: NZ_CP016556
• Coordinates: 1786594..1787601 (-)
• Length: 335 a.a.
• NCBI ID: WP_006963339.1
• Uniprot ID: A0A097QNP8
• Organism: Vibrio coralliilyticus strain 58
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1781594..1792601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BA953_RS08000 (BA953_08000)	frdC	1782152..1782535 (+)	384	WP_065740848.1	fumarate reductase subunit FrdC	-
BA953_RS08005 (BA953_08005)	frdD	1782548..1782925 (+)	378	WP_065740849.1	fumarate reductase subunit FrdD	-
BA953_RS08010 (BA953_08010)	-	1782986..1783669 (-)	684	WP_065740850.1	nitroreductase family protein	-
BA953_RS08015 (BA953_08015)	hslU	1783852..1785186 (-)	1335	WP_065740851.1	HslU--HslV peptidase ATPase subunit	-
BA953_RS08020 (BA953_08020)	hslV	1785224..1785769 (-)	546	WP_006963336.1	ATP-dependent protease subunit HslV	-
BA953_RS08025 (BA953_08025)	-	1785931..1786479 (-)	549	WP_029236296.1	SPOR domain-containing protein	-
BA953_RS08030 (BA953_08030)	cytR	1786594..1787601 (-)	1008	WP_006963339.1	DNA-binding transcriptional regulator CytR	Regulator
BA953_RS08035 (BA953_08035)	priA	1787850..1790051 (-)	2202	WP_065740852.1	primosomal protein N'	-
BA953_RS08040 (BA953_08040)	rpmE	1790343..1790561 (+)	219	WP_019277580.1	50S ribosomal protein L31	-
BA953_RS08045 (BA953_08045)	-	1790813..1792090 (+)	1278	WP_038513924.1	malic enzyme-like NAD(P)-binding protein	-
BA953_RS08050 (BA953_08050)	metJ	1792178..1792498 (-)	321	WP_006963343.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36965.58 Da
• Isoelectric Point: 6.0455

>NTDB_id=189151 BA953_RS08030 WP_006963339.1 1786594..1787601(-) (cytR) [Vibrio coralliilyticus strain 58]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQISGPSSAVLCQFRYQGYQQALRRAGISMNPNYCIYGDFSFEDGAKAVRQLLALPEPPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRVI

Nucleotide

• Length: 1008 bp

>NTDB_id=189151 BA953_RS08030 WP_006963339.1 1786594..1787601(-) (cytR) [Vibrio coralliilyticus strain 58]
ATGGCGACAATGAAGGATGTTGCTCAGCTGGCAGGCGTTTCAACTGCAACAGTATCGCGTGCTCTAATGAACCCGGAAAA
AGTATCTTCAGCCACAAGGAAGCGGGTCGAAGATGCAGTTTTAGAAGCCGGATATTCACCAAATTCTCTGGCGCGCAACC
TGCGCCGAAATGAGTCCAAAACCATAATTGCAATCATCCCGGATATTTGTGATCCCTACTACACAGAGATCATCCGTGGG
ATTGAAGACGCTGCGATGGAACATGGCTACATCGTGCTGCTTGGAGACAGTGGTCAGCAGAAAAAGCGTGAGAGTTCTTT
TGTCAATCTTGTCTTTACTAAGCAGGCCGATGGAATGTTGCTGCTTGGTACTGATCTGCCGTTTGACGTCAGCAAACCTG
AGCAGAAAAACCTGCCGCCTATGGTGATGGCATGTGAGTTTGCACCTGAACTGGAGCTGCCAACGGTGCACATTGATAAC
CTGACATCGGCATTTGAAGCCGTGAACTATCTTACGCAGATGGGTCACAAGCGCATTGCTCAGATTTCGGGCCCTAGCTC
TGCGGTGCTGTGCCAGTTCCGCTACCAAGGTTACCAGCAAGCGTTACGCCGAGCCGGCATTAGTATGAATCCGAATTACT
GTATCTACGGTGACTTCTCGTTTGAAGATGGTGCGAAAGCCGTCAGACAATTGTTGGCTTTACCTGAGCCGCCAACCGCG
ATTTTCTGTCACAACGATGCGATGGCCATCGGGGCAATTCAAGAAGCGAAGAAGCTGGGCTTGCGCGTCCCGCAAGACCT
GTCTGTCGTTGGCTTTGATGATATTCAGTTTGCTCAGTACTGCGATCCACCACTGACGACGATTTCTCAGCCACGTTACG
AGATTGGCCGACAGGCAATGTTGATGATGCTTGAGTTGTTGCGCGGCCATGATGTTCGTGCCGGTTCTCGATTGCTGGAA
ACTCAGCTGGTTGTCAGGGAAAGCGCTGCTCCACCGCGAGTCATCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A097QNP8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.771	99.104	0.919
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896