Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   B7R57_RS13015 Genome accession   NZ_CP020656
Coordinates   2487193..2487663 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain K5     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2482193..2492663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7R57_RS12985 (B7R57_13025) murC 2482756..2484069 (+) 1314 WP_101766569.1 UDP-N-acetylmuramate--L-alanine ligase -
  B7R57_RS12990 (B7R57_13030) - 2484143..2484634 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  B7R57_RS12995 (B7R57_13035) - 2484708..2485097 (+) 390 Protein_2453 hypothetical protein -
  B7R57_RS13005 (B7R57_13045) - 2485376..2486677 (+) 1302 WP_001242319.1 pyrimidine-nucleoside phosphorylase -
  B7R57_RS13010 (B7R57_13050) - 2486691..2487041 (+) 351 WP_001024035.1 membrane protein -
  B7R57_RS13015 (B7R57_13055) luxS 2487193..2487663 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  B7R57_RS13020 (B7R57_13060) - 2487974..2489158 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  B7R57_RS13025 (B7R57_13065) - 2489158..2490351 (+) 1194 WP_000183718.1 hypothetical protein -
  B7R57_RS13030 (B7R57_13070) - 2490750..2491421 (+) 672 WP_000120545.1 DUF2750 domain-containing protein -
  B7R57_RS13035 (B7R57_13075) coaW 2491551..2492354 (-) 804 WP_000862727.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=188975 B7R57_RS13015 WP_000164421.1 2487193..2487663(-) (luxS) [Staphylococcus aureus strain K5]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=188975 B7R57_RS13015 WP_000164421.1 2487193..2487663(-) (luxS) [Staphylococcus aureus strain K5]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGGAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404