Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BBI11_RS02355 Genome accession   NZ_CP016538
Coordinates   444311..445261 (+) Length   316 a.a.
NCBI ID   WP_068460268.1    Uniprot ID   A0A2I0EUE6
Organism   Planococcus maritimus strain DSM 17275     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 439311..450261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBI11_RS02340 (BBI11_03200) - 440275..440988 (+) 714 WP_068460261.1 VOC family protein -
  BBI11_RS02345 (BBI11_03205) hflX 441086..442357 (+) 1272 WP_068460263.1 GTPase HflX -
  BBI11_RS02350 (BBI11_03210) - 442532..443410 (+) 879 WP_068460266.1 DUF6612 family protein -
  BBI11_RS02355 (BBI11_03215) ceuB 444311..445261 (+) 951 WP_068460268.1 ABC transporter permease Machinery gene
  BBI11_RS02360 (BBI11_03220) - 445254..446204 (+) 951 WP_068460270.1 iron chelate uptake ABC transporter family permease subunit -
  BBI11_RS02365 (BBI11_03225) - 446201..446962 (+) 762 WP_068460272.1 ABC transporter ATP-binding protein -
  BBI11_RS02370 (BBI11_03230) - 447092..447733 (+) 642 WP_068460274.1 phosphatase PAP2 family protein -
  BBI11_RS02375 (BBI11_03235) - 448074..449357 (-) 1284 WP_068460277.1 ammonium transporter -
  BBI11_RS02380 (BBI11_03240) - 449370..449711 (-) 342 WP_068460279.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34956.32 Da        Isoelectric Point: 10.1518

>NTDB_id=188942 BBI11_RS02355 WP_068460268.1 444311..445261(+) (ceuB) [Planococcus maritimus strain DSM 17275]
MKKRILIPILILLSFISLFVGVSSISPLDLLDFQSEETQIFLVSRFPRLVAILLAGAGMSMAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMIEKMAVAFFFALAGTFLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYRADVI
QNMSAWLQGDFSMVMKGSYELLYISVPVFIIAYMYANRFTVAGMGEDFSKNLGLKYRSVVNIGLTLVALITATVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTAMLGAIFLLVCDILGRVLIYPYEITISLMVGVIGSFIFLIMLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=188942 BBI11_RS02355 WP_068460268.1 444311..445261(+) (ceuB) [Planococcus maritimus strain DSM 17275]
ATGAAAAAACGTATTCTAATACCCATATTGATCCTTTTATCGTTCATCTCCCTGTTTGTCGGAGTTAGCAGTATTAGTCC
GCTCGACCTTCTGGATTTTCAATCAGAAGAAACGCAGATTTTCCTCGTTAGCCGTTTTCCTCGACTCGTCGCGATTTTGC
TTGCGGGAGCAGGCATGAGCATGGCGGGGCTCATCATGCAGCAATTGAGCCGCAATAAATTCGTCTCGCCGACAACTGCC
GGGACGCTCGATGCGACACGTCTCGGGATTCTCGTCTCGATGTTATTGTTTGCGAATGCATCGATGATTGAAAAAATGGC
GGTGGCTTTCTTCTTCGCACTCGCCGGCACGTTCTTGTTCATGCAAATCCTCAACCGCATCAAATTCAAAGATGCCATCT
TTATTCCGCTCATCGGCTTGATGTTCGGCAATATCCTGTCTTCGATCACCACGTTTTTCGCCTACCGCGCAGACGTTATC
CAGAACATGTCAGCTTGGCTGCAGGGCGATTTCTCGATGGTCATGAAAGGTAGTTATGAACTTCTTTACATCAGCGTGCC
CGTTTTCATCATCGCTTATATGTACGCCAACCGCTTTACAGTCGCAGGGATGGGGGAGGATTTCTCCAAAAATCTCGGAC
TGAAATATCGCAGTGTTGTCAACATCGGCTTGACCTTGGTGGCGCTCATTACAGCGACTGTCGTATTGACTGTTGGAATG
ATTCCATTTCTCGGCTTGATTATTCCGAATATCGTCTCCATCTTCAAGGGAGACCATCTTCAAAAAACCTTGCCGCATAC
CGCAATGCTCGGAGCCATTTTCTTATTGGTGTGCGACATTCTCGGGCGGGTCTTGATTTATCCGTATGAGATCACGATCA
GCCTGATGGTCGGTGTCATCGGAAGCTTTATCTTTCTAATCATGCTGTTTAGGAGGAAAGCATATGCGTGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I0EUE6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.994

99.051

0.535

Multiple sequence alignment