Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | E613_RS02355 | Genome accession | NZ_CP020603 |
| Coordinates | 450973..451338 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain E6130952 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 445973..456338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E613_RS02325 (E613_04110) | pyrR | 446595..447107 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| E613_RS02330 (E613_04120) | ruvX | 447219..447653 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| E613_RS02335 (E613_04130) | - | 447653..448222 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| E613_RS02340 (E613_04140) | - | 448271..449164 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| E613_RS02345 (E613_04150) | gshB | 449311..450264 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| E613_RS02350 (E613_04160) | pilG | 450519..450926 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| E613_RS02355 (E613_04170) | pilH | 450973..451338 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| E613_RS02360 (E613_04180) | - | 451389..451925 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| E613_RS02365 (E613_04190) | pilJ | 452010..454058 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| E613_RS02370 (E613_04200) | pilK | 454119..454994 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=188626 E613_RS02355 WP_003084587.1 450973..451338(+) (pilH) [Pseudomonas aeruginosa strain E6130952]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=188626 E613_RS02355 WP_003084587.1 450973..451338(+) (pilH) [Pseudomonas aeruginosa strain E6130952]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |