Detailed information NTG0188619

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: E613_RS00300
• Genome accession: NZ_CP020603
• Coordinates: 21770..22795 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain E6130952
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16770..27795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E613_RS00275 (E613_00140)	-	16959..17276 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
E613_RS00280 (E613_00150)	trkA	17425..18798 (-)	1374	WP_003097289.1	Trk system potassium transporter TrkA	-
E613_RS00285 (E613_00160)	rsmB	18825..20129 (-)	1305	WP_014603454.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
E613_RS00290 (E613_00170)	fmt	20126..21070 (-)	945	WP_023098410.1	methionyl-tRNA formyltransferase	-
E613_RS00295 (E613_00180)	def	21125..21631 (-)	507	WP_003097293.1	peptide deformylase	-
E613_RS00300 (E613_00190)	tsaP	21770..22795 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
E613_RS00305 (E613_00200)	dprA	22930..24018 (+)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
E613_RS00310 (E613_00210)	-	24059..24616 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
E613_RS00315 (E613_00220)	-	24626..25603 (-)	978	WP_003097303.1	NADPH:quinone reductase	-
E613_RS00320 (E613_00230)	hemF	25794..26711 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
E613_RS00325 (E613_00240)	aroE	26769..27593 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=188619 E613_RS00300 WP_003097294.1 21770..22795(+) (tsaP) [Pseudomonas aeruginosa strain E6130952]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=188619 E613_RS00300 WP_003097294.1 21770..22795(+) (tsaP) [Pseudomonas aeruginosa strain E6130952]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393