Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | BB344_RS09225 | Genome accession | NZ_CP016497 |
| Coordinates | 1873233..1873862 (-) | Length | 209 a.a. |
| NCBI ID | WP_000839136.1 | Uniprot ID | A0A0D8W3X3 |
| Organism | Escherichia coli strain UPEC 26-1 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1868233..1878862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB344_RS09210 (BB344_09210) | helD | 1868475..1870529 (-) | 2055 | WP_001443200.1 | DNA helicase IV | - |
| BB344_RS09215 (BB344_09215) | yccF | 1870652..1871098 (+) | 447 | WP_001261236.1 | YccF domain-containing protein | - |
| BB344_RS09220 (BB344_09220) | yccS | 1871108..1873270 (+) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| BB344_RS09225 (BB344_09225) | sxy/tfoX | 1873233..1873862 (-) | 630 | WP_000839136.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| BB344_RS09230 (BB344_09230) | sulA | 1874081..1874590 (+) | 510 | WP_000288707.1 | SOS-induced cell division inhibitor SulA | - |
| BB344_RS09240 (BB344_09240) | ompA | 1874946..1875998 (+) | 1053 | WP_001528868.1 | porin OmpA | - |
| BB344_RS09245 (BB344_09245) | matP | 1876076..1876528 (-) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| BB344_RS09250 (BB344_09250) | ycbZ | 1876714..1878474 (+) | 1761 | WP_000156504.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24128.06 Da Isoelectric Point: 9.2180
>NTDB_id=188583 BB344_RS09225 WP_000839136.1 1873233..1873862(-) (sxy/tfoX) [Escherichia coli strain UPEC 26-1]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=188583 BB344_RS09225 WP_000839136.1 1873233..1873862(-) (sxy/tfoX) [Escherichia coli strain UPEC 26-1]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTAACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTAACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.043 |
100 |
0.99 |