Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | A4W80_RS04015 | Genome accession | NZ_CP016470 |
| Coordinates | 780697..781698 (+) | Length | 333 a.a. |
| NCBI ID | WP_076786758.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain TMW 1.595 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 775697..786698
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W80_RS03975 (A4W80_03955) | - | 775873..776886 (+) | 1014 | WP_081394496.1 | YeiH family protein | - |
| A4W80_RS03980 (A4W80_03960) | - | 776977..777216 (-) | 240 | WP_076786750.1 | cytochrome b5 domain-containing protein | - |
| A4W80_RS03985 (A4W80_03965) | - | 777411..777746 (+) | 336 | WP_076786752.1 | hypothetical protein | - |
| A4W80_RS03995 (A4W80_03975) | - | 777927..778304 (-) | 378 | WP_076786754.1 | hypothetical protein | - |
| A4W80_RS04000 (A4W80_03980) | - | 778407..778907 (+) | 501 | WP_004270893.1 | VanZ family protein | - |
| A4W80_RS04005 (A4W80_03985) | - | 778997..779728 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| A4W80_RS04010 (A4W80_03990) | comGA | 779832..780707 (+) | 876 | WP_076786756.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A4W80_RS04015 (A4W80_03995) | comGB | 780697..781698 (+) | 1002 | WP_076786758.1 | type II secretion system F family protein | Machinery gene |
| A4W80_RS04020 (A4W80_04000) | comGC | 781695..782003 (+) | 309 | WP_004270901.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A4W80_RS04025 (A4W80_04005) | - | 782035..782427 (+) | 393 | WP_004270899.1 | hypothetical protein | - |
| A4W80_RS04030 (A4W80_04010) | - | 782492..782719 (+) | 228 | WP_158070299.1 | hypothetical protein | - |
| A4W80_RS10665 | - | 782685..782768 (+) | 84 | Protein_775 | type II secretion system protein | - |
| A4W80_RS04035 (A4W80_04015) | - | 782790..783170 (+) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| A4W80_RS04040 (A4W80_04020) | - | 783148..783471 (+) | 324 | WP_039099486.1 | hypothetical protein | - |
| A4W80_RS04045 | - | 783596..784216 (+) | 621 | WP_253733291.1 | hypothetical protein | - |
| A4W80_RS04050 | - | 784108..784605 (+) | 498 | WP_253733292.1 | class I SAM-dependent methyltransferase | - |
| A4W80_RS04055 (A4W80_04030) | - | 784627..785820 (+) | 1194 | WP_039099488.1 | acetate/propionate family kinase | - |
| A4W80_RS04060 (A4W80_04035) | - | 785880..786332 (+) | 453 | WP_076786762.1 | laaL | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37893.09 Da Isoelectric Point: 9.6278
>NTDB_id=188473 A4W80_RS04015 WP_076786758.1 780697..781698(+) (comGB) [Latilactobacillus curvatus strain TMW 1.595]
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=188473 A4W80_RS04015 WP_076786758.1 780697..781698(+) (comGB) [Latilactobacillus curvatus strain TMW 1.595]
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
56.677 |
100 |
0.574 |