Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | A4W80_RS01490 | Genome accession | NZ_CP016470 |
| Coordinates | 291608..292315 (-) | Length | 235 a.a. |
| NCBI ID | WP_081394487.1 | Uniprot ID | A0A385ABK3 |
| Organism | Latilactobacillus curvatus strain TMW 1.595 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 286608..297315
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W80_RS01485 (A4W80_01485) | rpoC | 287894..291535 (+) | 3642 | WP_076786309.1 | DNA-directed RNA polymerase subunit beta' | - |
| A4W80_RS01490 | comC | 291608..292315 (-) | 708 | WP_081394487.1 | prepilin peptidase | Machinery gene |
| A4W80_RS01495 (A4W80_01495) | rpsL | 292586..292999 (+) | 414 | WP_004270179.1 | 30S ribosomal protein S12 | - |
| A4W80_RS01500 (A4W80_01500) | rpsG | 293089..293559 (+) | 471 | WP_076786307.1 | 30S ribosomal protein S7 | - |
| A4W80_RS01505 (A4W80_01505) | fusA | 293651..295738 (+) | 2088 | WP_004270213.1 | elongation factor G | - |
| A4W80_RS01510 (A4W80_01510) | rsgA | 296381..297145 (-) | 765 | WP_081394486.1 | ribosome small subunit-dependent GTPase A | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 26588.96 Da Isoelectric Point: 6.9090
>NTDB_id=188469 A4W80_RS01490 WP_081394487.1 291608..292315(-) (comC) [Latilactobacillus curvatus strain TMW 1.595]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT
Nucleotide
Download Length: 708 bp
>NTDB_id=188469 A4W80_RS01490 WP_081394487.1 291608..292315(-) (comC) [Latilactobacillus curvatus strain TMW 1.595]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGGCACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGGCACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Latilactobacillus sakei subsp. sakei 23K |
50.661 |
96.596 |
0.489 |