Detailed information NTG0188463

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: A4W75_RS10905
• Genome accession: NZ_CP016467
• Coordinates: 1571083..1571790 (+)
• Length: 235 a.a.
• NCBI ID: WP_081038321.1
• Uniprot ID: A0AAJ0PCE4
• Organism: Latilactobacillus curvatus strain TMW 1.27
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1566083..1576790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W75_RS08155 (A4W75_07945)	fusA	1567660..1569747 (-)	2088	WP_004270213.1	elongation factor G	-
A4W75_RS08160 (A4W75_07950)	rpsG	1569839..1570309 (-)	471	WP_054644265.1	30S ribosomal protein S7	-
A4W75_RS08165 (A4W75_07955)	rpsL	1570399..1570812 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
A4W75_RS10905	comC	1571083..1571790 (+)	708	WP_081038321.1	prepilin peptidase	Machinery gene
A4W75_RS08175 (A4W75_07965)	rpoC	1571863..1575504 (-)	3642	WP_004270200.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26544.85 Da
• Isoelectric Point: 6.9137

>NTDB_id=188463 A4W75_RS10905 WP_081038321.1 1571083..1571790(+) (comC) [Latilactobacillus curvatus strain TMW 1.27]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIANT

Nucleotide

• Length: 708 bp

>NTDB_id=188463 A4W75_RS10905 WP_081038321.1 1571083..1571790(+) (comC) [Latilactobacillus curvatus strain TMW 1.27]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGTGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGTGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGCAAACACATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489