Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | A4W81_RS07155 | Genome accession | NZ_CP016465 |
| Coordinates | 1393908..1394603 (-) | Length | 231 a.a. |
| NCBI ID | WP_147658291.1 | Uniprot ID | - |
| Organism | Latilactobacillus sakei strain TMW 1.3 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1388908..1399603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W81_RS07145 (A4W81_07020) | secA | 1390624..1392987 (-) | 2364 | WP_011374203.1 | preprotein translocase subunit SecA | - |
| A4W81_RS07150 (A4W81_07025) | raiA | 1393236..1393781 (-) | 546 | WP_056948836.1 | ribosome-associated translation inhibitor RaiA | - |
| A4W81_RS07155 (A4W81_07030) | comFC | 1393908..1394603 (-) | 696 | WP_147658291.1 | ComF family protein | Machinery gene |
| A4W81_RS07160 (A4W81_07035) | comFA | 1394579..1395916 (-) | 1338 | WP_056948838.1 | DEAD/DEAH box helicase | Machinery gene |
| A4W81_RS07165 (A4W81_07040) | - | 1395978..1396643 (+) | 666 | WP_112220945.1 | YigZ family protein | - |
| A4W81_RS07170 (A4W81_07045) | - | 1396669..1397757 (-) | 1089 | WP_056948881.1 | MraY family glycosyltransferase | - |
| A4W81_RS07175 (A4W81_07050) | rny | 1397909..1399474 (-) | 1566 | WP_076632200.1 | ribonuclease Y | - |
Sequence
Protein
Download Length: 231 a.a. Molecular weight: 26933.39 Da Isoelectric Point: 9.4488
>NTDB_id=188422 A4W81_RS07155 WP_147658291.1 1393908..1394603(-) (comFC) [Latilactobacillus sakei strain TMW 1.3]
MAITINCLMCQNVIIEKPSIKQLLQLKPLLKPHICQICLQQFEPISGNQCSDCSRPLLTGILCSDCQHWRQLYPQQHFKN
QALFTYNRAMQLYFQRYKGQGDYQLRLLFERDIQTRFPVKPNVAYVPIPSDEQHQQARGFNPVQGLFENCFPLMSLLKKR
PTEKGQAQKNRAERLASPQFFELIPQKLPDKLQSITILDDIYTTGRTLWHAQQCLRARYPQITINAITLAR
MAITINCLMCQNVIIEKPSIKQLLQLKPLLKPHICQICLQQFEPISGNQCSDCSRPLLTGILCSDCQHWRQLYPQQHFKN
QALFTYNRAMQLYFQRYKGQGDYQLRLLFERDIQTRFPVKPNVAYVPIPSDEQHQQARGFNPVQGLFENCFPLMSLLKKR
PTEKGQAQKNRAERLASPQFFELIPQKLPDKLQSITILDDIYTTGRTLWHAQQCLRARYPQITINAITLAR
Nucleotide
Download Length: 696 bp
>NTDB_id=188422 A4W81_RS07155 WP_147658291.1 1393908..1394603(-) (comFC) [Latilactobacillus sakei strain TMW 1.3]
ATGGCGATTACAATCAACTGTTTAATGTGTCAAAATGTCATTATTGAAAAGCCAAGTATTAAACAACTGCTACAACTAAA
ACCACTACTTAAACCGCATATCTGTCAAATTTGTTTACAGCAGTTTGAACCTATCAGTGGCAACCAGTGTTCGGATTGTA
GTCGGCCACTATTGACGGGCATTTTATGTTCTGATTGTCAGCATTGGCGACAACTTTACCCCCAACAGCATTTTAAAAAT
CAAGCATTGTTTACTTATAATCGGGCGATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGATTATCAATTACGGTT
ACTATTTGAACGGGACATTCAAACGCGGTTTCCAGTAAAGCCCAATGTAGCTTACGTGCCGATCCCATCCGATGAGCAAC
ATCAACAAGCACGCGGTTTTAATCCAGTCCAAGGCTTATTCGAAAATTGTTTTCCGCTAATGTCACTCTTGAAAAAGCGA
CCAACGGAAAAGGGGCAAGCGCAAAAAAATCGTGCAGAACGACTCGCAAGTCCGCAATTTTTTGAATTAATACCACAAAA
GTTACCTGATAAGCTACAGTCGATAACGATTCTAGATGATATTTACACGACCGGTCGAACGTTGTGGCATGCTCAGCAAT
GTCTGCGTGCTCGTTATCCGCAAATTACAATTAATGCAATTACTTTGGCCAGATAG
ATGGCGATTACAATCAACTGTTTAATGTGTCAAAATGTCATTATTGAAAAGCCAAGTATTAAACAACTGCTACAACTAAA
ACCACTACTTAAACCGCATATCTGTCAAATTTGTTTACAGCAGTTTGAACCTATCAGTGGCAACCAGTGTTCGGATTGTA
GTCGGCCACTATTGACGGGCATTTTATGTTCTGATTGTCAGCATTGGCGACAACTTTACCCCCAACAGCATTTTAAAAAT
CAAGCATTGTTTACTTATAATCGGGCGATGCAGTTATATTTTCAACGTTATAAGGGCCAAGGAGATTATCAATTACGGTT
ACTATTTGAACGGGACATTCAAACGCGGTTTCCAGTAAAGCCCAATGTAGCTTACGTGCCGATCCCATCCGATGAGCAAC
ATCAACAAGCACGCGGTTTTAATCCAGTCCAAGGCTTATTCGAAAATTGTTTTCCGCTAATGTCACTCTTGAAAAAGCGA
CCAACGGAAAAGGGGCAAGCGCAAAAAAATCGTGCAGAACGACTCGCAAGTCCGCAATTTTTTGAATTAATACCACAAAA
GTTACCTGATAAGCTACAGTCGATAACGATTCTAGATGATATTTACACGACCGGTCGAACGTTGTGGCATGCTCAGCAAT
GTCTGCGTGCTCGTTATCCGCAAATTACAATTAATGCAATTACTTTGGCCAGATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
91.549 |
61.472 |
0.563 |