Detailed information NTG0188340

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BSY238_RS08000
• Genome accession: NZ_CP016448
• Coordinates: 1726153..1727184 (-)
• Length: 343 a.a.
• NCBI ID: WP_069038667.1
• Uniprot ID: A0A1B3LLM7
• Organism: Methyloversatilis sp. RAC08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1721153..1732184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSY238_RS07965 (BSY238_1613)	-	1721196..1721522 (-)	327	WP_069038660.1	PsiF family protein	-
BSY238_RS07970 (BSY238_1614)	hprK	1721626..1722561 (-)	936	WP_069038661.1	HPr(Ser) kinase/phosphatase	-
BSY238_RS07975 (BSY238_1615)	ptsN	1722530..1723018 (-)	489	WP_069038662.1	PTS IIA-like nitrogen regulatory protein PtsN	-
BSY238_RS07980 (BSY238_1616)	raiA	1723139..1723459 (-)	321	WP_069038663.1	ribosome-associated translation inhibitor RaiA	-
BSY238_RS07985 (BSY238_1617)	rpoN/rpoN1	1723523..1724959 (-)	1437	WP_069038664.1	RNA polymerase factor sigma-54	Machinery gene
BSY238_RS07990 (BSY238_1618)	lptB	1724980..1725720 (-)	741	WP_069038665.1	LPS export ABC transporter ATP-binding protein	-
BSY238_RS07995 (BSY238_1619)	recX	1725713..1726156 (-)	444	WP_069038666.1	recombination regulator RecX	-
BSY238_RS08000 (BSY238_1620)	recA	1726153..1727184 (-)	1032	WP_069038667.1	recombinase RecA	Machinery gene
BSY238_RS08005 (BSY238_1621)	-	1727241..1727735 (-)	495	WP_069038668.1	CinA family protein	-
BSY238_RS08010 (BSY238_1622)	-	1727735..1728181 (-)	447	WP_083224136.1	phosphatidylglycerophosphatase A	-
BSY238_RS08015 (BSY238_1623)	thiL	1728240..1729202 (-)	963	WP_069038670.1	thiamine-phosphate kinase	-
BSY238_RS08020 (BSY238_1624)	nusB	1729223..1729714 (-)	492	WP_069038671.1	transcription antitermination factor NusB	-
BSY238_RS08025 (BSY238_1625)	ribH	1729718..1730191 (-)	474	WP_069038672.1	6,7-dimethyl-8-ribityllumazine synthase	-
BSY238_RS08030 (BSY238_1626)	ribBA	1730212..1731300 (-)	1089	WP_069038673.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
BSY238_RS08035 (BSY238_1627)	-	1731297..1731905 (-)	609	WP_069038674.1	riboflavin synthase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36823.50 Da
• Isoelectric Point: 5.5822

>NTDB_id=188340 BSY238_RS08000 WP_069038667.1 1726153..1727184(-) (recA) [Methyloversatilis sp. RAC08]
MDDSKAKALAAALAQIEKQFGKGSIMRMSDGQLENDIQAVSTGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLTLQVI
AEMQKIGGTAAFIDAEHALDVQYAGKLGVNVSDLLISQPDTGEQALEIVDMLVRSGGVDVIVIDSVAALTPKAEIEGEMG
DSLPGLQARLMSQALRKLTASIKRTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKKGEEVIGS
ETRVKVVKNKVAPPFKQTEFDILYGEGISREGEIIELGVLHKFVEKSGAWYSYGTERIGQGKDNVREFLRANPVMAREIE
NKVRVACGMPEMGVVVAGREEAA

Nucleotide

• Length: 1032 bp

>NTDB_id=188340 BSY238_RS08000 WP_069038667.1 1726153..1727184(-) (recA) [Methyloversatilis sp. RAC08]
ATGGACGACAGCAAGGCCAAGGCGCTCGCGGCAGCGCTGGCACAGATTGAGAAGCAGTTCGGCAAGGGCTCGATCATGCG
CATGAGCGACGGCCAGCTCGAAAACGACATCCAGGCCGTATCGACCGGTTCGCTGGGACTGGACATCGCGCTCGGAATCG
GCGGCCTGCCGCGCGGTCGGGTGGTCGAAATCTACGGTCCGGAATCATCCGGCAAGACCACGCTGACGCTGCAGGTCATC
GCCGAAATGCAGAAGATCGGCGGCACGGCGGCCTTCATCGACGCCGAACACGCACTCGACGTGCAGTACGCCGGCAAGCT
TGGCGTAAATGTCAGCGACCTGCTGATTTCCCAGCCCGACACCGGCGAGCAGGCACTGGAAATCGTCGACATGCTGGTGC
GTTCCGGCGGTGTGGACGTGATCGTCATCGACTCGGTCGCCGCGCTGACGCCGAAGGCCGAAATCGAGGGCGAAATGGGC
GATTCGTTGCCCGGCCTGCAGGCCCGCCTGATGAGTCAGGCGCTGCGCAAGCTGACGGCGAGCATCAAGCGCACCAACAC
GATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAATCCGGAAACCACCACCGGCGGCAATG
CGCTGAAGTTCTATGCCTCGGTCCGCCTCGACATCCGCCGCATCGGCGCGATCAAGAAGGGCGAAGAGGTGATCGGCTCG
GAAACCCGCGTCAAGGTGGTGAAGAACAAGGTTGCGCCGCCGTTCAAGCAGACCGAATTCGACATCCTGTACGGCGAGGG
CATTTCGCGCGAAGGCGAAATCATCGAGCTGGGCGTGCTGCACAAATTCGTAGAAAAGTCGGGCGCCTGGTATTCCTACG
GCACCGAGCGCATCGGCCAGGGCAAGGACAACGTGCGCGAGTTCCTGCGCGCCAATCCGGTCATGGCACGCGAGATCGAG
AACAAGGTGCGCGTGGCCTGCGGCATGCCTGAAATGGGCGTCGTTGTGGCAGGACGGGAAGAGGCTGCGTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A1B3LLM7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	80.615	94.752	0.764
recA	Pseudomonas stutzeri DSM 10701	74.383	94.461	0.703
recA	Neisseria gonorrhoeae MS11	70.175	99.708	0.7
recA	Neisseria gonorrhoeae MS11	70.175	99.708	0.7
recA	Neisseria gonorrhoeae strain FA1090	70.175	99.708	0.7
recA	Vibrio cholerae strain A1552	69.388	100	0.694
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.388	100	0.694
recA	Glaesserella parasuis strain SC1401	72.136	94.169	0.679
recA	Acinetobacter baylyi ADP1	71.605	94.461	0.676
recA	Acinetobacter baumannii D1279779	70.679	94.461	0.668
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.45	99.708	0.633
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.939	95.627	0.621
recA	Bacillus subtilis subsp. subtilis str. 168	63.582	97.668	0.621
recA	Helicobacter pylori strain NCTC11637	62.952	96.793	0.609
recA	Helicobacter pylori 26695	62.349	96.793	0.603
recA	Latilactobacillus sakei subsp. sakei 23K	61.818	96.21	0.595
recA	Streptococcus mutans UA159	59.459	97.085	0.577
recA	Streptococcus pyogenes NZ131	59.394	96.21	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.681	94.169	0.571
recA	Streptococcus mitis NCTC 12261	59.574	95.918	0.571
recA	Streptococcus mitis SK321	59.574	95.918	0.571
recA	Streptococcus pneumoniae D39	59.271	95.918	0.569
recA	Streptococcus pneumoniae R6	59.271	95.918	0.569
recA	Streptococcus pneumoniae TIGR4	59.271	95.918	0.569
recA	Streptococcus pneumoniae Rx1	59.271	95.918	0.569
recA	Lactococcus lactis subsp. cremoris KW2	59.021	95.335	0.563