Detailed information NTG0188175

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: VSVS05_RS16710
• Genome accession: NZ_CP016415
• Coordinates: 491466..492563 (-)
• Length: 365 a.a.
• NCBI ID: WP_005599399.1
• Uniprot ID: A0A1C7FG75
• Organism: Vibrio scophthalmi strain VS-05
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 486466..497563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VSVS05_RS16695 (VSVS05_03412)	glpD	486578..488134 (+)	1557	WP_065546282.1	glycerol-3-phosphate dehydrogenase	-
VSVS05_RS16700 (VSVS05_03413)	-	488195..488860 (+)	666	WP_065546283.1	PilZ domain-containing protein	-
VSVS05_RS16705 (VSVS05_03414)	luxQ	488899..491466 (-)	2568	WP_065546284.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
VSVS05_RS16710 (VSVS05_03415)	luxP	491466..492563 (-)	1098	WP_005599399.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
VSVS05_RS16715 (VSVS05_03416)	-	492679..493002 (-)	324	WP_005599401.1	GIY-YIG nuclease family protein	-
VSVS05_RS16720 (VSVS05_03417)	-	492995..493651 (-)	657	WP_065546285.1	YceH family protein	-
VSVS05_RS16725 (VSVS05_03418)	-	493685..493879 (-)	195	WP_005599403.1	hypothetical protein	-
VSVS05_RS16730 (VSVS05_03419)	-	494070..494390 (+)	321	WP_005599404.1	DUF496 family protein	-
VSVS05_RS16735 (VSVS05_03420)	-	494796..495032 (+)	237	WP_005599405.1	YgjV family protein	-
VSVS05_RS16740 (VSVS05_03421)	glpK	495158..496663 (-)	1506	WP_065546286.1	glycerol kinase GlpK	-
VSVS05_RS16745 (VSVS05_03422)	-	496774..497367 (-)	594	WP_005599407.1	OmpA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41158.12 Da
• Isoelectric Point: 5.2647

>NTDB_id=188175 VSVS05_RS16710 WP_005599399.1 491466..492563(-) (luxP) [Vibrio scophthalmi strain VS-05]
MYKTALATLLSVFSSVALAHSTQVLNGYWEYDEYLSSHPSQKALTGKLAQAVREHPAAINEVQDRPISISVVYPGQQISD
YWIRNIKAFEARLDKLGIKYEINQVFTRPNVDVRQQSLSLLEAIQNNSDYLIFTLDTTRHRKFIEHVISSTDTKLILQNI
TTPVRAWDDHQPFMYVGFDHQLGTQHIENYYKEKAATGSKYSVLYFSEGYISDARGDTFIEEMSHHDGYKLSSSFYTKAT
RESGFNAAMNAVEKDPDISFIYACSTDVALGAVDALKQLKRGDILVNGWGGGTAELEAIEQGDIDVTVMRMNDDTGIAMA
EAIKWDLEGKQVPHVYSGDFEVVTSADSGEKIERLKRRAFRYSDQ

Nucleotide

• Length: 1098 bp

>NTDB_id=188175 VSVS05_RS16710 WP_005599399.1 491466..492563(-) (luxP) [Vibrio scophthalmi strain VS-05]
ATGTATAAAACGGCTCTAGCTACGCTACTGTCTGTCTTCTCGTCCGTCGCGTTAGCGCATTCAACTCAAGTGTTAAACGG
CTATTGGGAATACGATGAATATTTGTCGTCTCATCCAAGTCAAAAGGCCTTAACGGGTAAGCTCGCGCAAGCGGTGAGAG
AGCATCCTGCAGCTATCAATGAAGTGCAAGATAGACCAATCTCAATCTCGGTAGTCTATCCAGGACAGCAAATCTCAGAC
TACTGGATTCGAAATATCAAAGCGTTTGAAGCTCGCTTAGATAAGTTAGGTATTAAGTATGAGATTAATCAGGTGTTTAC
TCGACCGAATGTCGATGTACGACAGCAAAGCTTGTCACTGCTTGAAGCAATTCAGAATAATTCTGATTACCTCATTTTTA
CACTAGATACCACTCGCCATCGAAAATTTATCGAACACGTGATTAGCTCGACCGACACTAAACTCATTTTGCAGAATATT
ACCACGCCAGTGCGCGCTTGGGATGATCATCAGCCATTTATGTATGTTGGTTTTGACCACCAGCTTGGCACACAGCACAT
CGAAAACTACTACAAAGAAAAAGCCGCAACCGGCAGTAAGTATTCCGTGTTGTACTTTTCAGAAGGCTACATTAGTGATG
CGCGTGGAGATACCTTCATTGAAGAGATGAGCCATCATGACGGCTATAAGTTAAGTTCTTCATTCTACACCAAAGCGACC
AGAGAATCGGGTTTCAACGCAGCCATGAATGCGGTGGAGAAGGATCCGGATATTTCATTTATTTATGCTTGTTCAACCGA
TGTCGCACTGGGTGCCGTCGATGCGTTAAAACAGCTTAAACGTGGCGATATTTTGGTTAACGGCTGGGGGGGAGGCACTG
CTGAGTTAGAGGCGATTGAACAAGGTGATATTGATGTGACGGTGATGCGTATGAACGATGACACCGGCATAGCGATGGCT
GAGGCCATTAAGTGGGACTTAGAAGGTAAGCAAGTTCCACATGTTTATTCGGGCGACTTTGAAGTGGTAACGAGTGCCGA
CAGCGGTGAAAAAATCGAACGCTTAAAGCGTCGTGCATTTAGGTACTCAGACCAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: A0A1C7FG75

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.641	99.178	0.641