Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | clem_RS13590 | Genome accession | NZ_CP016397 |
| Coordinates | 3043673..3044317 (+) | Length | 214 a.a. |
| NCBI ID | WP_094092039.1 | Uniprot ID | A0A222P688 |
| Organism | Legionella clemsonensis strain CDC-D5610 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3038673..3049317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| clem_RS13570 (clem_13770) | - | 3039454..3040245 (+) | 792 | WP_094092035.1 | sulfite exporter TauE/SafE family protein | - |
| clem_RS13575 (clem_13775) | - | 3040356..3042167 (+) | 1812 | WP_094092036.1 | hypothetical protein | - |
| clem_RS13580 (clem_13780) | dapB | 3042238..3042972 (-) | 735 | WP_094092037.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| clem_RS13585 (clem_13785) | - | 3043203..3043421 (-) | 219 | WP_094092038.1 | hypothetical protein | - |
| clem_RS13590 (clem_13790) | rocC | 3043673..3044317 (+) | 645 | WP_094092039.1 | ProQ/FinO family protein | Regulator |
| clem_RS13595 (clem_13795) | pyk | 3044450..3045859 (-) | 1410 | WP_094092040.1 | pyruvate kinase | - |
| clem_RS13600 (clem_13800) | - | 3045843..3047030 (-) | 1188 | WP_094092041.1 | phosphoglycerate kinase | - |
| clem_RS13605 (clem_13805) | gap | 3047042..3048034 (-) | 993 | WP_094092042.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23999.86 Da Isoelectric Point: 11.0894
>NTDB_id=187982 clem_RS13590 WP_094092039.1 3043673..3044317(+) (rocC) [Legionella clemsonensis strain CDC-D5610]
MRRQELHPRTATINKTQKNKSKKARNEALSWLAATFPQAFDNTLRIRPLKIGIMDDILAVASKAAACGISKSKLREAVVI
FTRRIDYLTCLKAREMRVDLAGNPVSIVTEEEAERAAVKIKKRIEKSVRNARKQSPVKTTAVYSNVKFSTQTQDTTMPYF
PERAPAFSAQNPIAPTPRAAVVVKHKPSRSFDPDAVARLKEKLGLSRKVQEQET
MRRQELHPRTATINKTQKNKSKKARNEALSWLAATFPQAFDNTLRIRPLKIGIMDDILAVASKAAACGISKSKLREAVVI
FTRRIDYLTCLKAREMRVDLAGNPVSIVTEEEAERAAVKIKKRIEKSVRNARKQSPVKTTAVYSNVKFSTQTQDTTMPYF
PERAPAFSAQNPIAPTPRAAVVVKHKPSRSFDPDAVARLKEKLGLSRKVQEQET
Nucleotide
Download Length: 645 bp
>NTDB_id=187982 clem_RS13590 WP_094092039.1 3043673..3044317(+) (rocC) [Legionella clemsonensis strain CDC-D5610]
ATGAGAAGGCAAGAACTTCATCCACGCACAGCAACAATTAATAAAACTCAAAAAAATAAATCCAAAAAAGCCCGGAATGA
AGCGTTATCATGGCTGGCAGCTACGTTTCCTCAAGCTTTTGACAATACCTTGCGAATTCGTCCTCTAAAAATAGGCATTA
TGGATGATATATTAGCCGTAGCCAGTAAGGCAGCAGCGTGTGGTATTTCCAAAAGTAAATTACGTGAAGCGGTTGTTATT
TTCACCCGACGGATTGATTATTTAACTTGTCTTAAAGCACGGGAAATGCGAGTTGATCTGGCAGGGAACCCTGTTAGCAT
AGTCACCGAAGAAGAGGCTGAAAGAGCTGCTGTTAAAATTAAAAAACGGATCGAAAAAAGCGTACGCAACGCCCGCAAGC
AGTCTCCAGTTAAAACAACTGCAGTTTATTCTAACGTCAAATTTTCTACTCAAACACAAGACACGACTATGCCTTATTTC
CCGGAGCGTGCACCGGCCTTCAGCGCACAAAATCCAATAGCACCGACACCTCGTGCTGCTGTTGTGGTAAAGCATAAACC
CTCAAGATCGTTTGATCCTGATGCGGTTGCCAGATTAAAAGAAAAATTAGGCTTATCTCGAAAAGTACAAGAACAAGAGA
CATAA
ATGAGAAGGCAAGAACTTCATCCACGCACAGCAACAATTAATAAAACTCAAAAAAATAAATCCAAAAAAGCCCGGAATGA
AGCGTTATCATGGCTGGCAGCTACGTTTCCTCAAGCTTTTGACAATACCTTGCGAATTCGTCCTCTAAAAATAGGCATTA
TGGATGATATATTAGCCGTAGCCAGTAAGGCAGCAGCGTGTGGTATTTCCAAAAGTAAATTACGTGAAGCGGTTGTTATT
TTCACCCGACGGATTGATTATTTAACTTGTCTTAAAGCACGGGAAATGCGAGTTGATCTGGCAGGGAACCCTGTTAGCAT
AGTCACCGAAGAAGAGGCTGAAAGAGCTGCTGTTAAAATTAAAAAACGGATCGAAAAAAGCGTACGCAACGCCCGCAAGC
AGTCTCCAGTTAAAACAACTGCAGTTTATTCTAACGTCAAATTTTCTACTCAAACACAAGACACGACTATGCCTTATTTC
CCGGAGCGTGCACCGGCCTTCAGCGCACAAAATCCAATAGCACCGACACCTCGTGCTGCTGTTGTGGTAAAGCATAAACC
CTCAAGATCGTTTGATCCTGATGCGGTTGCCAGATTAAAAGAAAAATTAGGCTTATCTCGAAAAGTACAAGAACAAGAGA
CATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
59.292 |
100 |
0.626 |