Detailed information NTG0187940

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BBJ33_RS16940
• Genome accession: NZ_CP016395
• Coordinates: 3477684..3478847 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain M75
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3472684..3483847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBJ33_RS16910 (BBJ33_16910)	-	3472949..3473368 (-)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-
BBJ33_RS16915 (BBJ33_16915)	comFC	3473442..3474131 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
BBJ33_RS16920 (BBJ33_16920)	-	3474137..3474421 (-)	285	WP_057080260.1	competence protein ComFB	-
BBJ33_RS16925 (BBJ33_16925)	comFA	3474479..3475864 (-)	1386	WP_069473599.1	DEAD/DEAH box helicase	Machinery gene
BBJ33_RS16930 (BBJ33_16930)	-	3475972..3476820 (-)	849	WP_043867471.1	DegV family protein	-
BBJ33_RS16935 (BBJ33_16935)	degU	3476918..3477607 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BBJ33_RS16940 (BBJ33_16940)	degS	3477684..3478847 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BBJ33_RS16945 (BBJ33_16945)	-	3479070..3479698 (+)	629	Protein_3349	YigZ family protein	-
BBJ33_RS16950 (BBJ33_16950)	-	3479703..3480917 (+)	1215	WP_043867473.1	LCP family protein	-
BBJ33_RS16955 (BBJ33_16955)	-	3481007..3482083 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BBJ33_RS16960 (BBJ33_16960)	-	3482216..3483412 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=187940 BBJ33_RS16940 WP_003151385.1 3477684..3478847(-) (degS) [Bacillus velezensis strain M75]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=187940 BBJ33_RS16940 WP_003151385.1 3477684..3478847(-) (degS) [Bacillus velezensis strain M75]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948