Detailed information NTG0187881

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BBJ33_RS01910
• Genome accession: NZ_CP016395
• Coordinates: 379287..380435 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus velezensis strain M75
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 374287..385435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBJ33_RS01890 (BBJ33_01890)	-	374684..375367 (-)	684	WP_060386755.1	ABC transporter ATP-binding protein	-
BBJ33_RS01895 (BBJ33_01895)	-	375382..376818 (-)	1437	WP_060386756.1	ABC transporter permease	-
BBJ33_RS01900 (BBJ33_01900)	-	377031..377714 (+)	684	WP_024084885.1	response regulator transcription factor	-
BBJ33_RS01905 (BBJ33_01905)	-	377701..379134 (+)	1434	WP_162130794.1	HAMP domain-containing sensor histidine kinase	-
BBJ33_RS01910 (BBJ33_01910)	rapC	379287..380435 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
BBJ33_RS01915 (BBJ33_01915)	phrC	380419..380538 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BBJ33_RS19650	-	380688..380783 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
BBJ33_RS01920 (BBJ33_01920)	-	380878..382242 (-)	1365	WP_014304341.1	aspartate kinase	-
BBJ33_RS01925 (BBJ33_01925)	ceuB	382657..383610 (+)	954	WP_046559346.1	ABC transporter permease	Machinery gene
BBJ33_RS01930 (BBJ33_01930)	-	383600..384547 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
BBJ33_RS01935 (BBJ33_01935)	-	384541..385299 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=187881 BBJ33_RS01910 WP_014304340.1 379287..380435(+) (rapC) [Bacillus velezensis strain M75]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=187881 BBJ33_RS01910 WP_014304340.1 379287..380435(+) (rapC) [Bacillus velezensis strain M75]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCCCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568