Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BBD27_RS04335 Genome accession   NZ_CP016394
Coordinates   816245..817012 (-) Length   255 a.a.
NCBI ID   WP_011681768.1    Uniprot ID   A0A0E2PYL2
Organism   Streptococcus thermophilus strain ND07     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 811245..822012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBD27_RS04315 (BBD27_ps26) ychF 811781..812896 (-) 1116 Protein_801 redox-regulated ATPase YchF -
  BBD27_RS04320 (BBD27_0837) - 813109..813300 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  BBD27_RS04325 (BBD27_0838) dnaN 813351..814487 (-) 1137 WP_024704280.1 DNA polymerase III subunit beta -
  BBD27_RS04330 (BBD27_0839) dnaA 814642..816006 (-) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  BBD27_RS04335 (BBD27_0840) spo0J 816245..817012 (-) 768 WP_011681768.1 ParB/RepB/Spo0J family partition protein Regulator
  BBD27_RS04340 (BBD27_0841) htrA 817078..818313 (-) 1236 WP_014727759.1 S1C family serine protease Regulator
  BBD27_RS04345 (BBD27_0842) rlmH 818517..818996 (+) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BBD27_RS04350 (BBD27_0843) - 819012..819695 (+) 684 WP_011226711.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.80 Da        Isoelectric Point: 9.4740

>NTDB_id=187839 BBD27_RS04335 WP_011681768.1 816245..817012(-) (spo0J) [Streptococcus thermophilus strain ND07]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=187839 BBD27_RS04335 WP_011681768.1 816245..817012(-) (spo0J) [Streptococcus thermophilus strain ND07]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2PYL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment