Detailed information NTG0187578

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: BBD34_RS10025
• Genome accession: NZ_CP016377
• Coordinates: 2198532..2199641 (-)
• Length: 369 a.a.
• NCBI ID: WP_078403243.1
• Uniprot ID: A0AAJ3NDN1
• Organism: Elizabethkingia ursingii strain G4123
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2193532..2204641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBD34_RS10000 (BBD34_09970)	-	2194790..2195521 (+)	732	WP_078403240.1	DNA alkylation repair protein	-
BBD34_RS10005 (BBD34_09975)	-	2195518..2195898 (-)	381	WP_059322971.1	group III truncated hemoglobin	-
BBD34_RS10010 (BBD34_09980)	-	2195992..2196483 (+)	492	WP_078403241.1	YkgJ family cysteine cluster protein	-
BBD34_RS10015 (BBD34_09985)	-	2196608..2196892 (+)	285	WP_059322791.1	hypothetical protein	-
BBD34_RS10020 (BBD34_09990)	gdhA	2196982..2198346 (-)	1365	WP_078403242.1	NADP-specific glutamate dehydrogenase	-
BBD34_RS10025 (BBD34_09995)	dprA	2198532..2199641 (-)	1110	WP_078403243.1	DNA-processing protein DprA	Machinery gene
BBD34_RS10030 (BBD34_10000)	-	2199679..2200446 (-)	768	WP_078403244.1	rhomboid family intramembrane serine protease	-
BBD34_RS10035 (BBD34_10005)	-	2200614..2201735 (+)	1122	WP_078403245.1	DUF3078 domain-containing protein	-
BBD34_RS10040 (BBD34_10010)	-	2201742..2203275 (-)	1534	Protein_1997	YifB family Mg chelatase-like AAA ATPase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41262.27 Da
• Isoelectric Point: 6.7682

>NTDB_id=187578 BBD34_RS10025 WP_078403243.1 2198532..2199641(-) (dprA) [Elizabethkingia ursingii strain G4123]
MFSEEHLYSIALRHCPQIGDLYFKKIVSTIGSAQKAWTLHKHELIKLYGIGNKIAEDIGKDSHLQFAETEIEFCYKNNIQ
ILLSHQGNFPELLYQCDDTPAILYQKGKFDHQRTNISIVGTRNSSKYGKEFITELLYSLKDNNIQTVSGLAIGTDTCTHE
ESLKNNIPTVAVLAHGFHMLYPNKNRKLADKIIELNGCLFTEFNSSQPPIRESFIQRNRIIAGISPATIITETAYGGGSV
STANYANIYNREVLALPGLIEDKYSQGCNLLISQNKARIIVSISDTIDYLGLVGKPVEQLPLFHKKEIPATLTSEQQLIL
SAIVDSPNINPDEIAEKVSLPVYKILPIILDLELLGHIKASSGRQYYPN

Nucleotide

• Length: 1110 bp

>NTDB_id=187578 BBD34_RS10025 WP_078403243.1 2198532..2199641(-) (dprA) [Elizabethkingia ursingii strain G4123]
ATGTTTTCCGAAGAGCATCTTTACTCCATAGCACTAAGACATTGCCCACAGATCGGGGATTTATACTTTAAGAAAATAGT
CAGTACAATAGGCTCAGCCCAAAAAGCATGGACCCTGCACAAGCATGAGCTGATTAAATTATATGGTATCGGAAACAAAA
TAGCGGAAGATATAGGGAAAGATTCTCATTTACAATTCGCTGAAACAGAGATAGAATTCTGCTATAAAAATAACATTCAG
ATCTTACTTTCTCATCAGGGAAATTTTCCAGAATTATTATACCAATGCGATGACACACCTGCCATACTCTATCAGAAAGG
AAAATTTGATCACCAAAGGACAAATATTAGCATAGTAGGCACAAGAAACAGCTCGAAGTATGGAAAAGAGTTTATTACCG
AACTTTTGTATTCTCTAAAAGATAACAATATCCAAACAGTAAGTGGACTTGCCATAGGCACGGACACTTGCACACATGAA
GAATCTTTAAAAAACAATATTCCCACTGTCGCAGTACTAGCACATGGTTTTCATATGCTATACCCCAATAAAAATAGAAA
ATTAGCTGATAAAATCATAGAACTCAACGGCTGTCTTTTTACTGAATTCAATTCATCACAGCCACCGATAAGGGAAAGTT
TTATCCAGAGAAACAGAATTATTGCCGGCATATCGCCTGCCACAATCATAACAGAAACGGCTTATGGCGGAGGCTCGGTA
AGTACTGCTAATTATGCCAATATATATAATCGTGAAGTTCTGGCTCTTCCAGGCCTTATTGAAGATAAATACAGCCAGGG
GTGCAACCTTTTGATTTCACAAAACAAAGCAAGAATTATTGTTTCCATTTCTGACACAATTGACTATCTAGGTCTTGTTG
GCAAACCAGTGGAACAACTCCCTTTATTTCATAAAAAAGAGATCCCCGCGACCCTTACATCGGAACAACAACTTATCCTA
TCCGCTATTGTAGATTCTCCTAACATAAATCCGGATGAAATTGCCGAAAAAGTATCTCTTCCTGTTTATAAAATTTTACC
CATAATATTAGATCTGGAACTTTTGGGGCACATTAAAGCCTCTTCCGGGAGACAATATTACCCCAATTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-280)

• DprA winged helix domain (DprA_WH) (309-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.639	99.187	0.512