Detailed information NTG0187465

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: B6N50_RS22380
• Genome accession: NZ_CP020543
• Coordinates: 4384763..4385788 (+)
• Length: 341 a.a.
• NCBI ID: WP_081508874.1
• Uniprot ID: -
• Organism: Escherichia coli C
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4379763..4390788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6N50_RS22360 (B6N50_22355)	metJ	4380825..4381142 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
B6N50_RS22365 (B6N50_22360)	yiiX	4381326..4381933 (+)	608	Protein_4097	YiiX family permuted papain-like enzyme	-
B6N50_RS22370 (B6N50_22365)	rpmE	4381994..4382206 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
B6N50_RS22375 (B6N50_22370)	priA	4382409..4384607 (+)	2199	WP_001400571.1	primosomal protein N'	Machinery gene
B6N50_RS22380 (B6N50_22375)	cytR	4384763..4385788 (+)	1026	WP_081508874.1	DNA-binding transcriptional regulator CytR	Regulator
B6N50_RS22385 (B6N50_22380)	ftsN	4385880..4386839 (+)	960	WP_000068828.1	cell division protein FtsN	-
B6N50_RS22390 (B6N50_22385)	hslV	4386932..4387462 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
B6N50_RS22395 (B6N50_22390)	hslU	4387472..4388803 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
B6N50_RS22400 (B6N50_22395)	menA	4388870..4389796 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
B6N50_RS22405 (B6N50_22400)	rraA	4389889..4390374 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
B6N50_RS22410 (B6N50_22405)	zapB	4390459..4390704 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37834.75 Da
• Isoelectric Point: 6.3842

>NTDB_id=187465 B6N50_RS22380 WP_081508874.1 4384763..4385788(+) (cytR) [Escherichia coli C]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNQTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=187465 B6N50_RS22380 WP_081508874.1 4384763..4385788(+) (cytR) [Escherichia coli C]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCAGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625