Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | A9X72_RS20760 | Genome accession | NZ_CP020520 |
| Coordinates | 3984694..3985134 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360895.1 | Uniprot ID | B7LFX5 |
| Organism | Escherichia coli strain 190 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3979694..3990134
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9X72_RS20735 (A9X72_20720) | aroP | 3980692..3982065 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| A9X72_RS20740 (A9X72_20725) | ampE | 3982108..3982962 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| A9X72_RS20745 (A9X72_20730) | ampD | 3982959..3983510 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| A9X72_RS20750 (A9X72_20735) | nadC | 3983598..3984491 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| A9X72_RS20760 (A9X72_20745) | pilA | 3984694..3985134 (+) | 441 | WP_000360895.1 | prepilin peptidase-dependent pilin | Machinery gene |
| A9X72_RS20765 (A9X72_20750) | pilB | 3985144..3986529 (+) | 1386 | WP_001025173.1 | type II secretion system protein GspE | Machinery gene |
| A9X72_RS20770 (A9X72_20755) | hofC | 3986519..3987721 (+) | 1203 | WP_000157227.1 | protein transport protein HofC | - |
| A9X72_RS20775 (A9X72_20760) | guaC | 3987756..3988799 (-) | 1044 | WP_001217342.1 | GMP reductase | - |
| A9X72_RS28425 | - | 3988955..3988999 (-) | 45 | WP_120795372.1 | protein YacM | - |
| A9X72_RS20780 (A9X72_20765) | coaE | 3989024..3989644 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15602.71 Da Isoelectric Point: 4.3927
>NTDB_id=187371 A9X72_RS20760 WP_000360895.1 3984694..3985134(+) (pilA) [Escherichia coli strain 190]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=187371 A9X72_RS20760 WP_000360895.1 3984694..3985134(+) (pilA) [Escherichia coli strain 190]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |