Detailed information NTG0187119

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BA890_RS11740
• Genome accession: NZ_CP016345
• Coordinates: 2581992..2585378 (+)
• Length: 1128 a.a.
• NCBI ID: WP_020333918.1
• Uniprot ID: A0AAN1CWN0
• Organism: Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 strain ATCC 14048
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2576992..2590378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BA890_RS11720 (BA890_11720)	erpA	2577359..2577700 (-)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-
BA890_RS11725 (BA890_11725)	hemL	2577943..2579238 (+)	1296	WP_014232904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BA890_RS11730 (BA890_11730)	-	2579578..2580663 (+)	1086	WP_014232906.1	AI-2E family transporter	-
BA890_RS11735 (BA890_11735)	rsmC	2580740..2581765 (+)	1026	WP_020333917.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BA890_RS24170	-	2581739..2581993 (-)	255	WP_024372754.1	hypothetical protein	-
BA890_RS11740 (BA890_11740)	chiS	2581992..2585378 (+)	3387	WP_020333918.1	response regulator	Regulator
BA890_RS11745 (BA890_11745)	-	2586254..2587936 (+)	1683	WP_014232909.1	ABC transporter substrate-binding protein	-
BA890_RS11750 (BA890_11750)	-	2588108..2589094 (+)	987	WP_014232910.1	ABC transporter permease	-
BA890_RS11755 (BA890_11755)	-	2589097..2590122 (+)	1026	WP_014232911.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127361.03 Da
• Isoelectric Point: 5.5783

>NTDB_id=187119 BA890_RS11740 WP_020333918.1 2581992..2585378(+) (chiS) [Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 strain ATCC 14048]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITALFFLQSHSQDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRQNAQQRYIEGSGDQTKTSILPESSNFVGSERYRLLHKRYHWAYSELLKRSDF
NDILLVDINGNVTYSIKKDDNYGTNLLTGRYKDAALGRAFQRLANDVSERRKVNEDYTPILISDFELENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADKNRESSIETLLVGGDQQPRTINTKLDDIQNSMEVITQALSGQTSVGTYTNGLDEA
IIAAYAPVKTRGVNWALVVQLPEKDAFSRIHQLEKLFVIAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
NTFDTVRKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGTIPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVNLASSTRLVLELSGHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTQAACGHFQVPEINLENTDDLSLPENPE
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCNELRQTFDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIRAHLTASKAEMRHIENKVLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRVRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYIGDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTHA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=187119 BA890_RS11740 WP_020333918.1 2581992..2585378(+) (chiS) [Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 strain ATCC 14048]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAAAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACCGCGCTTTTTTTCCTGCAGTCACACAGTCAAGATCTGCAAGAACAGAGCACGTCGCACCTGCTGT
CTGTACGAGATACCAAACAGCAGCAAATTATTGACTATTTTGAAGCACGCGAAACCGAAGTCATGGGCTTTGTCCGTTCG
GAGTTAGCTTATGCCAGCGGTGGACGCTTTTATGGTTTAGTCAATGCGTTCAGTCGCTTAGGAAACGACATTGAAGAGTC
ACGTCAAAATGCACAGCAACGTTATATTGAAGGCAGTGGCGATCAGACAAAAACGTCAATCTTGCCGGAGTCATCTAACT
TTGTCGGGAGCGAGCGTTATCGCCTGTTACACAAGCGCTATCATTGGGCTTATTCAGAACTTCTAAAACGCTCTGACTTC
AATGACATACTTTTAGTCGATATCAACGGTAACGTTACTTACTCAATCAAAAAAGACGACAATTACGGCACTAATCTTCT
CACTGGCCGCTATAAAGATGCTGCCCTAGGTAGAGCGTTTCAGCGCTTGGCCAATGATGTCAGCGAGCGCCGTAAAGTAA
ACGAAGACTATACTCCAATCCTTATCTCTGACTTTGAACTTGAAAATGGCAAGCAAGTCGCGTGGCTTGGCGCTCCTATC
GTTCAACAAGGATATCTCCATAGCTATGCCATGTTCCGATTACCAAATAATGGCATAACTAAACTAGTCGCAGACAAAAA
CCGCGAGTCATCGATTGAGACGCTATTAGTCGGAGGAGATCAACAACCTCGAACCATTAACACCAAGCTAGATGATATCC
AAAACAGTATGGAGGTCATCACTCAGGCACTTTCAGGTCAAACAAGCGTAGGTACTTATACAAACGGGCTCGATGAAGCC
ATTATCGCCGCCTATGCGCCAGTTAAAACCCGTGGTGTGAATTGGGCGTTGGTCGTGCAGTTACCAGAAAAAGACGCCTT
TTCTCGCATTCACCAGCTGGAAAAACTCTTCGTCATTGCGATGCTTACGGCGATCATACTGGTTGTGATTGCCTCGCACT
ATTTATCGAATTTCATCACCTCGCCACTGCTTAAATTAACCTGGGCAGCAGAGCGAGTATCAGCAGGCGATCTGGACGAA
AACACATTTGATACTGTTAGAAAAGACGAAATTGGTCGCTTAGCCATCAGTTTTGAGCGCATGCAACGTTCCATTCGTGA
AAAAATTCAGACGATCAAGAAGCAAAATGAAGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGACGAGCTGC
AACTGGCAGACAAGCTAAAAGATGAGTTTCTGGCAACGACCTCTCATGAACTGCGTACACCTTTGCACGGCATGGTCGGT
ATTGCAGAAACCTTGATATCCGGAGCCAACGGTACAATTCCGGCAAACCAGAAGTATCAGCTTGATATAATTATTAAAAG
TGGCCAACGTTTGGCTAACCTGGTCGACGACTTACTGGATTACCATAAAATGCGATACGGTAGCATGGACATCCAGAAGT
CGGCTGTTAACCTGGCAAGTTCAACCCGATTGGTGCTGGAGTTGTCGGGTCATTTACTTGGAAACAAGACCATTCGAATC
ATCAATCAAGTACCTAATGATCTCAAAGCAGTCTCAGCGGACCCACAACGACTTGAACAGGTGCTTTACAATCTGATAGG
AAACGCAATTAAGTACACCTCTGAAGGTAAGATCGTTATTTCTGCAGGAGTCGTAGACGATTTAGTTCGCGTTCAAGTGG
TCGATACCGGACAAGGTATTCCTGCTGAGCACCTTGAGCACATCTTTGAGCCTTTAATTCAAGCAGGACAGGACGAAAGT
CGATATCGTCAAGGTGCGGGGTTAGGTTTATCAATTAGCCGCCAGTTGATTGAGCTAATGGGAGGCTCCTTATATGTCAG
CAGCCAACCTATGGTAGGGACCACATTCAGCTTCACTCTGCCTCTCGCCAGTGAAGAAGAGATCCTAGCAACACAGACGC
AGGCAGCCTGTGGGCACTTCCAGGTTCCAGAAATTAACCTTGAGAACACAGACGACCTATCGCTACCAGAAAACCCAGAA
GGTCCGCTACTTTATGTAGCAGACGATGAACCAGTCAACCTACGAGTACTTGAAAGCTTTTTACGCTTAGAAGGCTATCG
TGTAAGAACCGTTTCAGATGGTCCAGAAACACTTGCTCTTGTCGAACAAGAAAAGCCGGAACTGCTGCTGCTCGATATCA
TGATGCCAGGAATGAGTGGCTATCAAGTATGTAATGAATTGCGTCAAACCTTTGATCATGCTGAGCTGCCAATCATTATG
CTAACCGCCTTAAGTCAAACTGAAGACCGAGTTAGAGGCTTTGAAGCCGGAGCAAACGATTATTTGTCGAAGCCTTTTAA
CAAACAAGAGCTTGCAGCCAGAATTAGAGCTCATTTGACCGCAAGTAAAGCAGAGATGCGCCATATTGAGAATAAAGTAC
TTGAGTCGGAACTTCGTCAACGAGCTGAAGTAGAAGCGAGCTTGCTTGAAACTCAGGGGCGTCTGCTAGAGCAGCTTGAG
TCCGCTCCTGAGGCGATTATTTGCTTGCGCGAAGATCAACGTGTTCGTTTTGCCAACGAAGCCGCATGTAAGCTGTTTAA
ACGTAGCTTAGAGCAAATTAAACGTTCGTCTGCCGATGAGCTGATTGCTCCAAAATTTCTGACCGTTAAGCAGCCACATT
ATTGCGGGAAAATTGATATTTATATCGGGGACATTCGCCAAAATATTGAAGCGGACATCCTTAAGCTTCCAGAAGGTTCC
GGCCTAGACGTTATGTACATATTTAATGTCGGTGGCGGCGCAAATACAGCGCGCATTCACAATCTGGAAACGGCAGTGGA
GGTACTTTCTCGCTATGCCTTTGACGGCGACAAAGAACAGCTACAGAAGCTTAAAGAGCTTGGAGGCGAGTTCACTCGAC
TGGCAGACAAAGCACTAGGCAATAAAAAAGACAAACAAGAAGTTATGCGTGAAGTACTGGTCGAAGCGATGACACATGCT
TTGGAATACTGGGAGTCTGTCACTGGAGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGTCTTTGGCGCGTTTACCTTGA
TAGAAGTACGCTACAAACCCGTACTCTAGATAAATACATGCGCATTGAAACCTTACCTAAAACTCCGCGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTCATCCTTGAGCACTGTAAAGAACAAAGTCCGGAGCGTGCTTACATTGAAGCGCAGCGTGAC
AAGCTGCAAAGGTTACTTACCAGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.554	100	0.756