Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AB477_RS06755 Genome accession   NZ_CP020467
Coordinates   1349966..1350589 (-) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain CFSAN007896     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1344966..1355589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB477_RS06730 (AB477_06775) rpmG 1346542..1346691 (+) 150 WP_107375217.1 50S ribosomal protein L33 -
  AB477_RS06735 (AB477_06780) rpsN 1347145..1347414 (+) 270 WP_001085657.1 30S ribosomal protein S14 -
  AB477_RS06740 (AB477_06785) guaC 1347571..1348548 (+) 978 WP_000688127.1 GMP reductase -
  AB477_RS06750 (AB477_06795) - 1348570..1349586 (+) 1017 WP_001798092.1 CAP domain-containing protein -
  AB477_RS06755 (AB477_06800) dinR/lexA 1349966..1350589 (-) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  AB477_RS06760 (AB477_06805) sosA 1350732..1350965 (+) 234 WP_000499651.1 DNA damage-induced cell division inhibitor SosA -
  AB477_RS06765 (AB477_06810) - 1351101..1351340 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  AB477_RS06770 (AB477_06815) recP/tkt 1351461..1353449 (+) 1989 WP_000481438.1 transketolase Machinery gene
  AB477_RS06775 (AB477_06820) - 1353727..1353969 (+) 243 WP_000246909.1 YneF family protein -
  AB477_RS06780 (AB477_06825) - 1353956..1354054 (+) 99 WP_016187065.1 hypothetical protein -
  AB477_RS06785 (AB477_06830) - 1354148..1354615 (+) 468 WP_000966146.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=186929 AB477_RS06755 WP_001208760.1 1349966..1350589(-) (dinR/lexA) [Staphylococcus aureus strain CFSAN007896]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=186929 AB477_RS06755 WP_001208760.1 1349966..1350589(-) (dinR/lexA) [Staphylococcus aureus strain CFSAN007896]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATCGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment