Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   FORC37_RS21705 Genome accession   NZ_CP016322
Coordinates   1377733..1378833 (-) Length   366 a.a.
NCBI ID   WP_088428552.1    Uniprot ID   A0A2S3R085
Organism   Vibrio vulnificus strain FORC_037     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 1372733..1383833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC37_RS21685 (FORC37_4025) - 1372796..1373257 (-) 462 WP_011081676.1 Lrp/AsnC family transcriptional regulator -
  FORC37_RS21690 (FORC37_4026) - 1373405..1374379 (+) 975 WP_015728159.1 DMT family transporter -
  FORC37_RS21695 (FORC37_4027) - 1374507..1375166 (+) 660 WP_011152472.1 PilZ domain-containing protein -
  FORC37_RS21700 (FORC37_4028) luxQ 1375163..1377736 (-) 2574 WP_011081679.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  FORC37_RS21705 (FORC37_4029) luxP 1377733..1378833 (-) 1101 WP_088428552.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  FORC37_RS21710 (FORC37_4030) traF 1379021..1380196 (-) 1176 WP_015728163.1 conjugal transfer protein TraF -
  FORC37_RS21715 - 1380273..1380569 (-) 297 WP_011152477.1 GIY-YIG nuclease family protein -
  FORC37_RS21720 (FORC37_4032) - 1380569..1381231 (-) 663 WP_088428553.1 YceH family protein -
  FORC37_RS21725 (FORC37_4033) - 1381297..1381506 (-) 210 WP_011081684.1 hypothetical protein -
  FORC37_RS21730 (FORC37_4034) - 1381776..1382090 (+) 315 WP_011081685.1 DUF496 family protein -
  FORC37_RS21735 (FORC37_4035) - 1382216..1383553 (+) 1338 WP_088428554.1 IS4-like element ISVvu3 family transposase -

Sequence


Protein


Download         Length: 366 a.a.        Molecular weight: 41260.85 Da        Isoelectric Point: 7.2604

>NTDB_id=186907 FORC37_RS21705 WP_088428552.1 1377733..1378833(-) (luxP) [Vibrio vulnificus strain FORC_037]
MKKILLTCLLASASFHASSHTSEVLSGYWAYQEFLEKFPQQGVLTRELSQVVRNAPVPLKRHQSKPIRISVVFPGQQISD
YWVRNLSAFEKRMDKLHISYQINQVFTRPNADVKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSETKLILQNI
TTPVQAWDKRQPFLYVGFDHAEGSIALADKFKQLYPQGANYSVLYFSEGYVSDARGDTFIHQMNHSDRFALKSSFYTKAT
KASGYESAINSLERYPDVDFIYACSTDVALGAIDALKALGRTNIKINGWGGGSAELAAIAAGDLDLTVMRMNDDTGIAMA
EAIKWDIEGRTVPTVFSGDFEVVTKEDSPEHIELLKKRAFRYSDQP

Nucleotide


Download         Length: 1101 bp        

>NTDB_id=186907 FORC37_RS21705 WP_088428552.1 1377733..1378833(-) (luxP) [Vibrio vulnificus strain FORC_037]
ATGAAAAAGATATTACTAACTTGTTTATTAGCGTCAGCAAGTTTTCATGCAAGCTCACATACGTCAGAAGTCCTCAGTGG
GTACTGGGCTTATCAAGAATTTTTGGAAAAATTTCCTCAACAAGGCGTGCTCACACGAGAACTGTCTCAGGTGGTTAGGA
ATGCGCCTGTGCCTTTAAAGCGTCATCAATCCAAGCCGATACGAATTTCAGTGGTATTTCCTGGTCAGCAGATCTCCGAT
TACTGGGTAAGAAATCTTTCCGCGTTTGAGAAACGCATGGATAAGCTGCATATCAGTTACCAAATCAATCAGGTTTTCAC
GCGGCCAAATGCCGATGTTAAACAGCAAAGCGTCTCCTTGATGGAAGCGTTAAAGAGTAAATCGGATTACCTCATTTTTA
CGCTCGACACGACGCGTCACCGCAAGTTCATTGAGCATGTATTAGACTCTTCCGAAACCAAGCTGATTCTGCAAAATATC
ACCACACCGGTTCAAGCTTGGGATAAAAGACAGCCATTTCTCTACGTCGGTTTTGACCATGCGGAAGGGAGCATTGCACT
GGCCGATAAGTTTAAACAGCTTTACCCACAAGGTGCAAACTACTCAGTTCTTTACTTTTCTGAAGGTTACGTGAGTGATG
CTCGTGGTGACACCTTTATACATCAGATGAATCACAGTGACCGATTTGCACTAAAAAGCTCTTTTTACACCAAAGCGACC
AAAGCCTCAGGCTATGAGTCCGCAATAAACAGTTTAGAGCGCTATCCTGATGTGGATTTTATCTACGCCTGTTCTACCGA
TGTGGCCCTTGGTGCCATTGATGCATTGAAAGCGTTGGGTCGCACAAACATCAAGATCAATGGATGGGGTGGTGGCTCTG
CTGAGCTTGCCGCGATCGCGGCAGGTGACCTTGATTTGACGGTTATGCGCATGAACGATGATACGGGAATCGCTATGGCT
GAGGCGATCAAATGGGACATTGAAGGAAGAACTGTCCCGACTGTCTTTTCTGGCGACTTTGAAGTAGTGACAAAAGAAGA
CTCGCCAGAACACATCGAACTATTGAAAAAACGCGCGTTTAGATATTCAGATCAGCCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S3R085

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.11

99.727

0.639


Multiple sequence alignment