Detailed information NTG0186879

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FORC37_RS12515
• Genome accession: NZ_CP016321
• Coordinates: 2542476..2545865 (+)
• Length: 1129 a.a.
• NCBI ID: WP_088428066.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_037
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2537476..2550865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC37_RS12495 (FORC37_2274)	erpA	2537875..2538216 (-)	342	WP_011079598.1	iron-sulfur cluster insertion protein ErpA	-
FORC37_RS12500 (FORC37_2275)	hemL	2538503..2539798 (+)	1296	WP_088428275.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FORC37_RS12505 (FORC37_2276)	-	2540048..2541133 (+)	1086	WP_038941396.1	AI-2E family transporter	-
FORC37_RS12510 (FORC37_2277)	rsmC	2541207..2542229 (+)	1023	WP_072608914.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FORC37_RS12515 (FORC37_2278)	chiS	2542476..2545865 (+)	3390	WP_088428066.1	response regulator	Regulator
FORC37_RS12520 (FORC37_2279)	-	2546806..2548479 (+)	1674	WP_088428067.1	ABC transporter substrate-binding protein	-
FORC37_RS12525 (FORC37_2280)	-	2548648..2549634 (+)	987	WP_011079592.1	ABC transporter permease	-
FORC37_RS12530 (FORC37_2281)	-	2549637..2550662 (+)	1026	WP_011079591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127477.45 Da
• Isoelectric Point: 5.8924

>NTDB_id=186879 FORC37_RS12515 WP_088428066.1 2542476..2545865(+) (chiS) [Vibrio vulnificus strain FORC_037]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPETLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=186879 FORC37_RS12515 WP_088428066.1 2542476..2545865(+) (chiS) [Vibrio vulnificus strain FORC_037]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTAAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAAAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAGCAACAACAGATCCTAGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TAGAGAAAACGCTCAGCAGCGCTATATTCAGGGATCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
ATGTCGGTAGTGAACGTTACCGTTTGCTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGATCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAGGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTCCGTCAATTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGCGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCGAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCGGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACTATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTCACGGATGTCGGGACTTATATCAACAGCAGCGGAGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCCATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCTGGTGATCTCGATGAA
AACATGATTAATACAGAGCGCAAAGACGAAATAGGCCGTTTAGCAATCAGTTTTGAACGAATGCAACGCTCGATTCGCGA
TAAAATTCAGCTTATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAGCTGATTCAAAAGCAAAACGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCAACTACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTAATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATTATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCGACTCGACTGGTATTGGAGCTGTCTCACCACTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAATGCGATCAAATACACCACTGAAGGTAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAATTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGAGACTCTGGT
CGTTATCGCCAAGGTGCAGGTCTGGGGCTTTCCATTAGCCGTCAACTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCTATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGCGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGAGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGAAACACTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGTATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAGTTGCCTATTATC
ATGCTAACAGCGTTGAGTCAGAGCGAAGATCGTGTACGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATCAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCGATGGTGGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAGTCGGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGCTCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATCGATATCTATGTCGATGATGTCCGACAGCATATTGAAACGGACATTCTTAAATTACCAGAAGGG
TCTGGCCTTGATGCCATGTTTATCTTTAATGTCGGGGGAGGCGCTGCTGCATCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACACAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAGTTTGCCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACACTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTAGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-926)

• Response regulator receiver domain (Response_reg) (726-837)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.236	100	0.772