Detailed information NTG0186858

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: B4V05_RS05370
• Genome accession: NZ_CP020459
• Coordinates: 1063152..1064198 (-)
• Length: 348 a.a.
• NCBI ID: WP_089535078.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FAM18311
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1058152..1069198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4V05_RS05345 (B4V05_05335)	rpsT	1058215..1058469 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
B4V05_RS05350 (B4V05_05340)	holA	1058538..1059566 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
B4V05_RS05355 (B4V05_05345)	comEC	1059563..1061830 (-)	2268	WP_076632419.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
B4V05_RS05360 (B4V05_05350)	-	1061827..1062315 (-)	489	WP_011374770.1	ComE operon protein 2	-
B4V05_RS05365 (B4V05_05355)	comEA	1062373..1063080 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
B4V05_RS05370 (B4V05_05360)	sepM	1063152..1064198 (-)	1047	WP_089535078.1	SepM family pheromone-processing serine protease	Regulator
B4V05_RS05375 (B4V05_05365)	coaD	1064200..1064697 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
B4V05_RS05380 (B4V05_05370)	rsmD	1064710..1065264 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
B4V05_RS05385 (B4V05_05375)	-	1065269..1065559 (-)	291	WP_076632420.1	YlbG family protein	-
B4V05_RS05390 (B4V05_05380)	-	1065583..1066671 (-)	1089	WP_076632421.1	CAP-associated domain-containing protein	-
B4V05_RS05395 (B4V05_05385)	-	1066682..1067869 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
B4V05_RS05400 (B4V05_05390)	-	1067878..1068174 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38137.96 Da
• Isoelectric Point: 9.6142

>NTDB_id=186858 B4V05_RS05370 WP_089535078.1 1063152..1064198(-) (sepM) [Latilactobacillus sakei strain FAM18311]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMVADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYAIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=186858 B4V05_RS05370 WP_089535078.1 1063152..1064198(-) (sepM) [Latilactobacillus sakei strain FAM18311]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGTTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATGCAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (210-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443