Detailed information NTG0186841

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BA203_RS26525
• Genome accession: NZ_CP016315
• Coordinates: 5047498..5048847 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225361.1
• Uniprot ID: -
• Organism: Bacillus cereus strain D12_2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5042498..5053847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BA203_RS26505 (BA203_25140)	secA	5042823..5045330 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
BA203_RS26510 (BA203_25145)	hpf	5045605..5046147 (-)	543	WP_000671185.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
BA203_RS26515 (BA203_25150)	cspC	5046470..5046667 (-)	198	WP_001990088.1	cold shock protein CspC	-
BA203_RS26520 (BA203_25155)	-	5046794..5047498 (-)	705	WP_033666421.1	ComF family protein	-
BA203_RS26525 (BA203_25160)	comFA	5047498..5048847 (-)	1350	WP_000225361.1	ATP-dependent helicase ComFA	Machinery gene
BA203_RS26530 (BA203_25165)	-	5048975..5050387 (-)	1413	WP_025710208.1	NlpC/P60 family protein	-
BA203_RS26535 (BA203_25170)	-	5050542..5050856 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
BA203_RS26545 (BA203_25175)	-	5051029..5051871 (-)	843	WP_000684725.1	DegV family protein	-
BA203_RS26550 (BA203_25180)	-	5052108..5052743 (+)	636	WP_000926672.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51147.06 Da
• Isoelectric Point: 10.0895

>NTDB_id=186841 BA203_RS26525 WP_000225361.1 5047498..5048847(-) (comFA) [Bacillus cereus strain D12_2]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTKAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=186841 BA203_RS26525 WP_000225361.1 5047498..5048847(-) (comFA) [Bacillus cereus strain D12_2]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAAAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	53.11	93.096	0.494