Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   A6J87_RS02095 Genome accession   NZ_CP020451
Coordinates   421264..423000 (-) Length   578 a.a.
NCBI ID   WP_080611510.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 416264..428000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS02075 (A6J87_02055) - 417114..417461 (-) 348 WP_080611508.1 DUF2200 domain-containing protein -
  A6J87_RS02080 (A6J87_02060) - 417470..418171 (-) 702 WP_049529396.1 glucosamine-6-phosphate deaminase -
  A6J87_RS02085 (A6J87_02065) queA 418324..419367 (+) 1044 WP_004182990.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  A6J87_RS02090 (A6J87_02070) rcrQ 419464..421251 (-) 1788 WP_080611509.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02095 (A6J87_02075) rcrP 421264..423000 (-) 1737 WP_080611510.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02100 (A6J87_02080) - 423186..423353 (-) 168 Protein_412 LysR family transcriptional regulator -
  A6J87_RS02105 (A6J87_02085) - 423363..424916 (-) 1554 WP_013990980.1 BCCT family transporter -
  A6J87_RS02110 (A6J87_02095) - 425144..425755 (-) 612 WP_037602032.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  A6J87_RS02115 (A6J87_02100) - 425783..425998 (-) 216 Protein_415 CHAP domain-containing protein -
  A6J87_RS02120 (A6J87_02105) tnpA 426372..426845 (-) 474 WP_002891962.1 IS200/IS605 family transposase -
  A6J87_RS10950 - 427112..427369 (-) 258 Protein_417 type II toxin-antitoxin system Phd/YefM family antitoxin -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64839.79 Da        Isoelectric Point: 5.4397

>NTDB_id=186714 A6J87_RS02095 WP_080611510.1 421264..423000(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_259]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHYEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESNE
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=186714 A6J87_RS02095 WP_080611510.1 421264..423000(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_259]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCGGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACTACGAGTATGAGCAGAT
TGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAACAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATCGCTATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
AGCAATCGGTGACTTGGTTGCTTTTATTGAGTACAGCTTCCATGCACTATTGTCCTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATCGGTGAAAA
TATTCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGTAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTGAAAGAAGTGACCCAGGATGCGACAGTCTTGATTGTGGCTCAACGTGTGGGGACTATCATGG
ATGCAGACCAGATTATCGTTCTTGATAAGGGTGAAATCGTGGGTCGTGGCCGCCACGAAGAGCTTATGGAAAGCAATGAG
ATTTACCGTGAAATTGCCAATTCTCAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365