Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J87_RS02090 Genome accession   NZ_CP020451
Coordinates   419464..421251 (-) Length   595 a.a.
NCBI ID   WP_080611509.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 414464..426251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS02060 (A6J87_02040) - 415077..415571 (-) 495 WP_004182984.1 DUF6773 family protein -
  A6J87_RS02065 (A6J87_02045) - 415585..415782 (-) 198 WP_004182985.1 helix-turn-helix transcriptional regulator -
  A6J87_RS02070 (A6J87_02050) - 415961..416944 (-) 984 WP_013990975.1 rhodanese-related sulfurtransferase -
  A6J87_RS02075 (A6J87_02055) - 417114..417461 (-) 348 WP_080611508.1 DUF2200 domain-containing protein -
  A6J87_RS02080 (A6J87_02060) - 417470..418171 (-) 702 WP_049529396.1 glucosamine-6-phosphate deaminase -
  A6J87_RS02085 (A6J87_02065) queA 418324..419367 (+) 1044 WP_004182990.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  A6J87_RS02090 (A6J87_02070) rcrQ 419464..421251 (-) 1788 WP_080611509.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02095 (A6J87_02075) rcrP 421264..423000 (-) 1737 WP_080611510.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02100 (A6J87_02080) - 423186..423353 (-) 168 Protein_412 LysR family transcriptional regulator -
  A6J87_RS02105 (A6J87_02085) - 423363..424916 (-) 1554 WP_013990980.1 BCCT family transporter -
  A6J87_RS02110 (A6J87_02095) - 425144..425755 (-) 612 WP_037602032.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  A6J87_RS02115 (A6J87_02100) - 425783..425998 (-) 216 Protein_415 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66514.62 Da        Isoelectric Point: 5.2446

>NTDB_id=186713 A6J87_RS02090 WP_080611509.1 419464..421251(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
MKKNKMQTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRHLSRQDYRKQFGMVLQDAWLYEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=186713 A6J87_RS02090 WP_080611509.1 419464..421251(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
ATGAAGAAAAATAAAATGCAAACAAATCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTAACTAAAAATACGCTGGCCATCATTAAAGGTGTTGAAGGCGCTCATATCAACGTCTCCTATGTTGGTTTGGTT
CTTGTTGTTTACCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACTTCAGTGTCATACTTTGATAAGCACCAGT
TCGGAGACCTCTTGGGACGCTTTACCAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTT
AATGCAGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACATTCTTTGGTGCCCGCTTTATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAGGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GATGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTTATTTCAGGACTCATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTTTGGGTGGTTTGCAAGTCTTGGCTGGTCGCCTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTGGACCGTATTTTCCAACTCATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTAGAGGGAGATTTGACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGCGAAATGGTAGCCATTGTCGGTCCTACCGGTGCTGGAAAATCAACCATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCCGGGTCTATCTCGGTTGACGGTCATGATATCCGTCACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTATGAGGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTCGAGGCGACTGACGAAGAAATCGTTGAAGCTGCTAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCTCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTTTGGAACTCTTGATTCAAAAAG
CCATGAAAACTCTCATGCAGGGTCGAACAAGCTTTGTCATCGCTCACCGTTTATCAACTATTCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.061

99.496

0.418

Multiple sequence alignment