Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AOT18_RS10250 | Genome accession | NZ_CP016300 |
| Coordinates | 2145896..2146276 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CMC-CR-MDR-Ab66 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2140896..2151276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOT18_RS10220 (AOT18_10065) | tadA | 2141014..2141517 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| AOT18_RS10225 (AOT18_10070) | - | 2141524..2142648 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AOT18_RS10230 (AOT18_10075) | ung | 2142645..2143358 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AOT18_RS10235 (AOT18_10080) | - | 2143409..2144005 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| AOT18_RS10240 (AOT18_10085) | gspK | 2144236..2145195 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| AOT18_RS10245 (AOT18_10090) | xcpW | 2145195..2145896 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AOT18_RS10250 (AOT18_10095) | xcpV | 2145896..2146276 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AOT18_RS10255 (AOT18_10100) | - | 2146266..2146820 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| AOT18_RS10260 (AOT18_10105) | - | 2146830..2147438 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AOT18_RS10265 (AOT18_10110) | - | 2147476..2148249 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AOT18_RS10270 (AOT18_10115) | - | 2148267..2148608 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AOT18_RS10275 (AOT18_10120) | - | 2148620..2149600 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| AOT18_RS10280 (AOT18_10125) | kdsB | 2149612..2150373 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=186692 AOT18_RS10250 WP_000836911.1 2145896..2146276(-) (xcpV) [Acinetobacter baumannii strain CMC-CR-MDR-Ab66]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=186692 AOT18_RS10250 WP_000836911.1 2145896..2146276(-) (xcpV) [Acinetobacter baumannii strain CMC-CR-MDR-Ab66]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |