Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   A6J85_RS08390 Genome accession   NZ_CP020450
Coordinates   1681258..1681722 (+) Length   154 a.a.
NCBI ID   WP_082307612.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_257     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1676258..1686722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J85_RS08365 (A6J85_08275) pyrF 1676718..1677410 (+) 693 WP_008809197.1 orotidine-5'-phosphate decarboxylase -
  A6J85_RS08370 (A6J85_08280) pyrE 1677489..1678118 (+) 630 WP_061593183.1 orotate phosphoribosyltransferase -
  A6J85_RS08375 (A6J85_08285) - 1678253..1679806 (+) 1554 WP_082307794.1 glycosyltransferase family 39 protein -
  A6J85_RS08380 (A6J85_08290) - 1679809..1680561 (+) 753 WP_061598805.1 DUF4336 domain-containing protein -
  A6J85_RS08385 (A6J85_08295) - 1680596..1681249 (+) 654 WP_082307611.1 uracil-DNA glycosylase -
  A6J85_RS08390 (A6J85_08300) mutX 1681258..1681722 (+) 465 WP_082307612.1 8-oxo-dGTP diphosphatase Machinery gene
  A6J85_RS08395 (A6J85_08305) - 1681735..1683003 (+) 1269 WP_082307613.1 dihydroorotase -
  A6J85_RS08400 (A6J85_08310) nt5e 1683145..1685325 (+) 2181 WP_082307614.1 cell surface ecto-5'-nucleotidase Nt5e -
  A6J85_RS08405 (A6J85_08315) plsY 1685343..1685987 (-) 645 WP_046165506.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17840.26 Da        Isoelectric Point: 4.3585

>NTDB_id=186675 A6J85_RS08390 WP_082307612.1 1681258..1681722(+) (mutX) [Streptococcus gordonii strain FDAARGOS_257]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLELGETPQECATREILEETGLKAKPVLKGIITFPEFTPNLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTHVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=186675 A6J85_RS08390 WP_082307612.1 1681258..1681722(+) (mutX) [Streptococcus gordonii strain FDAARGOS_257]
ATGGTTCAGTTAGCAACGATTTGTTATATTGATAATGGCCGGGAGTTTCTTATGTTGCATCGCAACAAAAAGCCCAATGA
TGTCCATGCTGGGAAGTGGATTGGTGTTGGTGGCAAGCTAGAGCTAGGAGAAACTCCGCAGGAATGCGCTACGCGCGAGA
TTCTAGAGGAGACGGGACTAAAGGCCAAGCCCGTTCTCAAAGGCATTATTACTTTTCCAGAGTTTACTCCTAATTTGGAC
TGGTATACCTATGTTTTTAAGGTGACTGAGTTTGAGGGGGAACTGATTGACTGCAATGAAGGTACTTTGGAATGGGTGCC
CTATGACCAGGTCTTATCTAAACCAACCTGGGAAGGCGATCATACCTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCTGCAAAGTTTGTTTATGACGGGGATAAACTGCTGGATACGCATGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

92.208

100

0.922

Multiple sequence alignment