Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   A6J85_RS05805 Genome accession   NZ_CP020450
Coordinates   1155249..1155707 (+) Length   152 a.a.
NCBI ID   WP_061594154.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_257     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150249..1160707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J85_RS05780 (A6J85_05715) glmS 1150348..1152159 (+) 1812 WP_061594151.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
  A6J85_RS05785 (A6J85_05720) - 1152275..1152799 (+) 525 WP_082307787.1 hypothetical protein -
  A6J85_RS05790 (A6J85_05725) scrK 1153040..1153939 (+) 900 WP_045773521.1 fructokinase ScrK -
  A6J85_RS05795 (A6J85_05730) - 1153988..1154398 (+) 411 WP_061596784.1 peptide deformylase -
  A6J85_RS05800 (A6J85_05735) - 1154408..1154977 (+) 570 WP_061596786.1 hypothetical protein -
  A6J85_RS05805 (A6J85_05740) rcrR 1155249..1155707 (+) 459 WP_061594154.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J85_RS05810 (A6J85_05745) rcrP 1155700..1157466 (+) 1767 WP_061594155.1 ABC transporter ATP-binding protein Regulator
  A6J85_RS05815 (A6J85_05750) rcrQ 1157456..1159213 (+) 1758 WP_061594156.1 ABC transporter ATP-binding protein Regulator
  A6J85_RS05820 (A6J85_05755) manA 1159373..1160317 (+) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17557.31 Da        Isoelectric Point: 7.9553

>NTDB_id=186645 A6J85_RS05805 WP_061594154.1 1155249..1155707(+) (rcrR) [Streptococcus gordonii strain FDAARGOS_257]
MEKPLLEFKRFGRKTQRIIEKRAKVCGMEFMGGPQGQVLHIVSHRAKRGLSTFIRDIEHELDISKSVASNLIKRMEKNGS
IFLEVSETDKRAKMIHLTAQSKQQLKELHDFFNEIDRCLLQGVSEEELATFTLVMAKFHQNIEKLESEDADV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=186645 A6J85_RS05805 WP_061594154.1 1155249..1155707(+) (rcrR) [Streptococcus gordonii strain FDAARGOS_257]
TTGGAAAAGCCTTTATTAGAATTCAAACGCTTTGGCAGAAAAACTCAACGGATCATTGAGAAACGCGCCAAGGTTTGTGG
GATGGAATTTATGGGAGGTCCACAAGGTCAAGTTCTTCACATCGTATCTCACCGAGCGAAGAGAGGACTTTCGACCTTTA
TTAGGGATATCGAGCATGAGTTAGATATTTCTAAGTCGGTGGCCAGCAATCTAATCAAACGGATGGAAAAAAATGGATCT
ATCTTTCTTGAGGTAAGCGAGACAGATAAAAGGGCCAAGATGATTCATTTAACAGCCCAGTCTAAACAACAATTGAAAGA
GTTACATGATTTTTTTAATGAAATCGATCGCTGTCTCCTCCAGGGTGTTTCAGAAGAAGAATTGGCAACCTTCACTCTGG
TTATGGCGAAATTTCACCAAAATATTGAGAAATTAGAAAGCGAGGATGCCGATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

40.411

96.053

0.388

Multiple sequence alignment