Detailed information NTG0186643

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AOT17_RS10230
• Genome accession: NZ_CP016298
• Coordinates: 2144909..2145610 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CMC-MDR-Ab59
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2139909..2150610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOT17_RS10200 (AOT17_10055)	-	2140215..2140658 (-)	444	WP_001246675.1	SRPBCC family protein	-
AOT17_RS10205 (AOT17_10060)	tadA	2140728..2141231 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AOT17_RS10210 (AOT17_10065)	-	2141238..2142362 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AOT17_RS10215 (AOT17_10070)	ung	2142359..2143072 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AOT17_RS10220 (AOT17_10075)	-	2143123..2143719 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AOT17_RS10225 (AOT17_10080)	gspK	2143950..2144909 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AOT17_RS10230 (AOT17_10085)	xcpW	2144909..2145610 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AOT17_RS10235 (AOT17_10090)	xcpV	2145610..2145990 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AOT17_RS10240 (AOT17_10095)	-	2145980..2146534 (-)	555	WP_000841373.1	type II secretion system protein	-
AOT17_RS10245 (AOT17_10100)	-	2146544..2147152 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AOT17_RS10250 (AOT17_10105)	-	2147190..2147963 (-)	774	WP_000497298.1	TatD family hydrolase	-
AOT17_RS10255 (AOT17_10110)	-	2147981..2148322 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AOT17_RS10260 (AOT17_10115)	-	2148334..2149314 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AOT17_RS10265 (AOT17_10120)	kdsB	2149326..2150087 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=186643 AOT17_RS10230 WP_000594589.1 2144909..2145610(-) (xcpW) [Acinetobacter baumannii strain CMC-MDR-Ab59]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=186643 AOT17_RS10230 WP_000594589.1 2144909..2145610(-) (xcpW) [Acinetobacter baumannii strain CMC-MDR-Ab59]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996