Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   A6J85_RS04275 Genome accession   NZ_CP020450
Coordinates   852699..853139 (-) Length   146 a.a.
NCBI ID   WP_082307328.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_257     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 847699..858139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J85_RS04260 (A6J85_04220) argR 849024..849461 (+) 438 WP_008809983.1 arginine repressor -
  A6J85_RS04265 (A6J85_04225) hexA 849640..852183 (+) 2544 WP_082307327.1 DNA mismatch repair protein MutS Machinery gene
  A6J85_RS04270 (A6J85_04230) - 852232..852702 (-) 471 WP_012131024.1 DUF3021 domain-containing protein -
  A6J85_RS04275 (A6J85_04235) brsR 852699..853139 (-) 441 WP_082307328.1 LytTR family DNA-binding domain-containing protein Regulator
  A6J85_RS04280 (A6J85_04240) hexB 853324..855267 (+) 1944 WP_045634766.1 DNA mismatch repair endonuclease MutL Machinery gene
  A6J85_RS04285 (A6J85_04245) - 855303..855824 (-) 522 WP_082307329.1 RDD family protein -
  A6J85_RS04290 (A6J85_04250) - 855808..856314 (-) 507 WP_045634808.1 helix-turn-helix domain-containing protein -
  A6J85_RS04295 (A6J85_04255) ruvA 856482..857075 (+) 594 WP_045634768.1 Holliday junction branch migration protein RuvA Machinery gene
  A6J85_RS04300 (A6J85_04260) - 857085..857639 (+) 555 WP_045634769.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17254.79 Da        Isoelectric Point: 9.1773

>NTDB_id=186618 A6J85_RS04275 WP_082307328.1 852699..853139(-) (brsR) [Streptococcus gordonii strain FDAARGOS_257]
MKVKLRIDSQVTEDSVSIEARLMTESIQELVHFAQHLGKEDKIHVKKEDEIYLLDAKEIHRIYTENRQVQVRTEKDGYRA
QQALYQLLQVLPDYFLQISQSEIINSRQISHLKLTPNGLIQIFLKNGDQTYSSRRYLKSIKERLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=186618 A6J85_RS04275 WP_082307328.1 852699..853139(-) (brsR) [Streptococcus gordonii strain FDAARGOS_257]
ATGAAAGTTAAGCTAAGAATCGATTCTCAAGTCACCGAAGACTCCGTCAGCATTGAGGCTCGCCTCATGACAGAAAGCAT
TCAGGAATTGGTCCACTTTGCTCAACATCTAGGCAAAGAAGACAAGATTCATGTCAAAAAAGAAGATGAAATCTATCTGC
TGGATGCTAAGGAAATCCACCGAATCTATACAGAAAATCGCCAGGTTCAGGTCCGAACAGAAAAAGACGGCTATCGAGCT
CAACAAGCTCTTTATCAGTTGCTGCAGGTCCTGCCGGACTATTTCCTGCAGATTTCTCAGTCGGAGATTATCAACAGCCG
GCAAATCAGCCACCTCAAGCTGACTCCAAATGGTCTGATTCAAATATTTCTGAAAAACGGCGACCAGACATACTCGTCCC
GCCGTTATCTCAAATCCATTAAAGAAAGGTTGCAATTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(49-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37