Detailed information NTG0186510

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BA022_RS18505
• Genome accession: NZ_CP016278
• Coordinates: 3959583..3960731 (-)
• Length: 382 a.a.
• NCBI ID: WP_088888419.1
• Uniprot ID: -
• Organism: Diaphorobacter nitroreducens strain SL-205
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3954583..3965731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BA022_RS18485 (BA022_18115)	-	3955876..3956658 (-)	783	WP_088888415.1	Crp/Fnr family transcriptional regulator	-
BA022_RS18490 (BA022_18120)	-	3956907..3957917 (-)	1011	WP_088888416.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
BA022_RS18495 (BA022_18125)	rpoH	3958044..3958979 (-)	936	WP_088888417.1	RNA polymerase sigma factor RpoH	-
BA022_RS18500 (BA022_18130)	cutA	3959169..3959531 (+)	363	WP_088888418.1	divalent-cation tolerance protein CutA	-
BA022_RS18505 (BA022_18135)	pilA	3959583..3960731 (-)	1149	WP_088888419.1	signal recognition particle-docking protein FtsY	Machinery gene
BA022_RS18510 (BA022_18140)	-	3960761..3962215 (+)	1455	WP_088888420.1	M16 family metallopeptidase	-
BA022_RS18515 (BA022_18145)	-	3962231..3963613 (+)	1383	WP_088888421.1	M16 family metallopeptidase	-
BA022_RS18520 (BA022_18150)	rsmD	3963610..3964233 (+)	624	WP_088888422.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BA022_RS18525 (BA022_18155)	coaD	3964377..3964874 (+)	498	WP_011806614.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39839.58 Da
• Isoelectric Point: 5.7333

>NTDB_id=186510 BA022_RS18505 WP_088888419.1 3959583..3960731(-) (pilA) [Diaphorobacter nitroreducens strain SL-205]
MFSFFKKKPPAPTEPALAPEDVASPAAPPAADAPASGGAFGWLRKPFGAGATSVAEPAAPSAGAPAAIDAPLAVPEPTPK
PEGARQGWMDRLKSGLRKTGSSIATVFTGTQINDALYDELEEALLMADTGVKATQHLLEDLKRRVKETKTTEPAAVKGLL
ADALADLLRPLEKPLVIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEI
VSQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKADASAPHEVLLVIDGNTGQNALAQVR
AFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFSAREFAQALLT

Nucleotide

• Length: 1149 bp

>NTDB_id=186510 BA022_RS18505 WP_088888419.1 3959583..3960731(-) (pilA) [Diaphorobacter nitroreducens strain SL-205]
ATGTTCAGTTTTTTCAAGAAGAAACCGCCCGCCCCCACCGAACCCGCCCTTGCACCCGAGGACGTGGCCAGCCCTGCGGC
GCCGCCCGCAGCCGACGCCCCCGCCAGCGGCGGCGCATTCGGCTGGCTGCGCAAGCCCTTTGGCGCAGGCGCCACCAGCG
TGGCGGAGCCGGCTGCCCCTTCGGCCGGCGCCCCCGCAGCCATCGACGCGCCCCTTGCCGTCCCCGAGCCCACCCCGAAG
CCCGAGGGCGCACGCCAGGGCTGGATGGACCGGCTGAAATCCGGCCTGCGCAAGACCGGCAGCAGCATCGCGACCGTCTT
CACGGGCACGCAGATCAACGACGCGCTGTACGACGAGCTGGAGGAAGCCCTGCTCATGGCCGACACCGGGGTGAAAGCCA
CGCAGCACCTGCTGGAGGACCTCAAGCGCCGCGTGAAAGAAACCAAGACCACCGAGCCTGCTGCCGTAAAGGGACTGCTG
GCCGATGCGCTGGCCGACCTGCTGCGGCCGCTGGAAAAGCCCCTGGTGATCGGCGAGCACACACCCACCGTGATCATGGT
GGCCGGCGTGAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCACCTGGCCGACCATGGCGAGAGCGTGC
TGCTGGCCGCCGCCGATACCTTCCGCGCCGCGGCGCGCGAGCAGTTGGGTGTCTGGGCCACGCGCAACACGGTGGAGATC
GTCAGCCAGGAAGGGGGCGACCCTGCCGCCGTGAGCTTTGACGCCGTTACCGCCGGCCGCGCGCGCGGCAAAGATGTGGT
GCTGGTGGACACTGCCGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCCGCCGCGTGGTCACCA
AGGCCGATGCCAGCGCCCCGCACGAGGTGCTACTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGGCGCAGGTGCGC
GCGTTCGACGACGCGCTTCAACTCACCGGCCTGATCGTCACCAAACTGGACGGCACGGCCAAGGGCGGCGTGCTGGCCGC
CATCGCGCAGGAGCGGCCCGTGCCCGTGTACTTCATTGGCGTGGGCGAGAAGGTGGAAGACCTGGAGACCTTCAGCGCAC
GCGAATTCGCCCAGGCCCTGCTGACCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (101-164)

• SRP54-type protein, GTPase domain (SRP54) (182-381)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.12	100	0.547