Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A6J72_RS02700 Genome accession   NZ_CP020433
Coordinates   545297..545983 (-) Length   228 a.a.
NCBI ID   WP_003073462.1    Uniprot ID   A0ABS3GAQ5
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 540297..550983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS02680 (A6J72_02670) - 540494..542473 (-) 1980 WP_082311716.1 FtsX-like permease family protein -
  A6J72_RS02685 (A6J72_02675) - 542466..543233 (-) 768 WP_082311711.1 ABC transporter ATP-binding protein -
  A6J72_RS02690 (A6J72_02680) - 543452..544210 (-) 759 WP_003078156.1 TraX family protein -
  A6J72_RS02695 (A6J72_02685) - 544333..545313 (-) 981 WP_009568229.1 sensor histidine kinase -
  A6J72_RS02700 (A6J72_02690) braR 545297..545983 (-) 687 WP_003073462.1 response regulator transcription factor Regulator
  A6J72_RS02705 (A6J72_02695) - 546075..547256 (+) 1182 WP_082311717.1 DUF2974 domain-containing protein -
  A6J72_RS02710 (A6J72_02700) metG 547346..549343 (-) 1998 WP_082311718.1 methionine--tRNA ligase -
  A6J72_RS02715 (A6J72_02705) - 549590..549850 (+) 261 WP_003043441.1 SemiSWEET family transporter -
  A6J72_RS02720 (A6J72_02715) - 550213..550845 (-) 633 WP_003028311.1 DUF421 domain-containing protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26383.70 Da        Isoelectric Point: 5.0048

>NTDB_id=186392 A6J72_RS02700 WP_003073462.1 545297..545983(-) (braR) [Streptococcus intermedius strain FDAARGOS_233]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=186392 A6J72_RS02700 WP_003073462.1 545297..545983(-) (braR) [Streptococcus intermedius strain FDAARGOS_233]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGTTGACGATTTTTGTTAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTTTACCGTTGTTTAATGGTTATCATTGGTGTCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCTTTTGACAACAATGT
TCTTCTTGCTAAAGTGCAAGGATTGTTGCGGCGCTCTTACGAGTTTGGTACTGATCAAAGTTTGCTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTACAGGTTAATCAATGGAACATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.545

96.491

0.478

Multiple sequence alignment