Detailed information NTG0186353

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BAU10_RS11950
• Genome accession: NZ_CP016224
• Coordinates: 2642143..2645529 (+)
• Length: 1128 a.a.
• NCBI ID: WP_005380036.1
• Uniprot ID: A0A2I3C928
• Organism: Vibrio alginolyticus strain ZJ-T
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2637143..2650529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAU10_RS11930 (BAU10_11930)	erpA	2637500..2637841 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
BAU10_RS11935 (BAU10_11935)	hemL	2638088..2639383 (+)	1296	WP_017820414.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BAU10_RS11940 (BAU10_11940)	-	2639729..2640814 (+)	1086	WP_005386541.1	AI-2E family transporter	-
BAU10_RS11945 (BAU10_11945)	rsmC	2640891..2641916 (+)	1026	WP_025768200.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BAU10_RS11950 (BAU10_11950)	chiS	2642143..2645529 (+)	3387	WP_005380036.1	response regulator	Regulator
BAU10_RS11955 (BAU10_11955)	-	2646311..2647993 (+)	1683	WP_005380037.1	ABC transporter substrate-binding protein	-
BAU10_RS11960 (BAU10_11960)	-	2648164..2649150 (+)	987	WP_005380038.1	ABC transporter permease	-
BAU10_RS11965 (BAU10_11965)	-	2649153..2650178 (+)	1026	WP_054730004.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126832.47 Da
• Isoelectric Point: 5.4999

>NTDB_id=186353 BAU10_RS11950 WP_005380036.1 2642143..2645529(+) (chiS) [Vibrio alginolyticus strain ZJ-T]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKSVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWVAEKVSAGDLDD
TSFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLGSATRLVLELSSHLLGSKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQTLAAHGHFQIPEVNVENSEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKVLESELRQRAVVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRSLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDIMYIFNVGGGASAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=186353 BAU10_RS11950 WP_005380036.1 2642143..2645529(+) (chiS) [Vibrio alginolyticus strain ZJ-T]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCTTGCAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACACTTACTGT
CTGTTCGAGATACAAAACAGCAGCAAATCATCGACTACTTTGAGGCACGAGAAACCGAAGTCATGGGCTTTGTGCGCTCA
GAGTTGGCTTACGCCAGTGGTGGCCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGATATTGAAGAGTC
TCGTAAAAACGCCCAACAGCGCTACATCGAGGGCAGCGGAGACCAAATCAAAACCTCAACGTTACCCGAGTCATCCAACT
ATGTAGGAAGTGAACGTTACCGGCTTTTACATAAACGCTATCATTGGGCCTACTTAGAGCTCCTCAAGCGCTCTGATTTT
AATGACATTTTGCTGGTAGACATCAATGGTAACGTCACCTACTCGATCAACAAAGACGATAACTACGGAACGAACTTGTT
ATCAGGCCCCTACAAAGACTCGGCACTTGGCAAAACTTTCAAGCGTCTCGCCGATGATGTGACTGAACGTCGAAAAGTAA
ACGAAGACTACACTCCTGTGATTGTGTCTGACTTCGAGCTGGAAGGGGGGAAATCAGTCGCTTGGCTAGGTGCACCAATT
GTTCAGCAAGGTTATCTACACAGCTATGCCATGTTCCGCTTGCCAAATAATGGCATCACTAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCAATTAACACCTTGCTGGTTGGAAATGATCACCAACCTCGCACAATTAACACGAAACAAGACGACATTA
AGAACAGTTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGTGTCGGCACTTACACAAACGGTTTAGGTGAAGAG
ATCATCGCGGCTTATGCACCGATTGAAACTCGTGGTGTGATTTGGGCGCTCGTCGTACAGTTACCAGAAAACGAAGCTTT
CGCTCGTATACATCAACTCGAAAAACTATTCGTTATCGCTATGTTGATCGCCATTATCCTTGTGGTGATCGCTTCTCACT
ATTTATCAAACTTTATCACTTCTCCGTTGCTGAAATTGACTTGGGTTGCCGAAAAGGTCTCTGCAGGGGATCTTGATGAC
ACGTCTTTTAATACGGTTCGTAAAGATGAAATTGGTCGGCTTGCGTTAAGCTTTGAACGAATGCAACGCTCTATTCGAGA
GAAGATTCAAACCATTAAGAAGCAAAATGAAGAACTAGAAAGCAACATACAGATCATTCAAAAACAGAATGAAGAACTGC
AATTGGCCGATAAATTAAAAGATGAATTCTTAGCCACGACTTCTCATGAACTTCGTACACCGTTACACGGCATGGTCGGG
ATTGCTGAAACCTTAGCGTCCGGCGCCAATGGCGCGATCCCCGCTAGCCAGAAATATCAGCTTGATATCATCATTAAAAG
TGGTCAGCGTCTCGCTAATCTAGTCGATGACTTGTTGGATTATCATAAAATGCGTTATGGAAGCATGGATATCCAGAAAT
CAGCAGTGAGTTTGGGCAGTGCAACACGATTGGTTTTAGAGCTTTCTAGCCATTTACTTGGAAGTAAAACCATCCGCATC
ATCAACCAAGTCCCTGCGGATTTAAAAGCAGTGTCAGCTGACCCGCAACGCCTTGAACAAGTGCTATATAACCTGATTGG
CAATGCGATTAAATACACCTCAGAAGGTAAAATTGTTATCTCCGCTAATGTGGTAGATGATCATGTACGCGTACAAGTCG
TGGATACTGGACAAGGAATTCCCGCAGAACAACTTGAACATATTTTTGAACCACTCATCCAAGCAGGGCAAGACGCGAGC
CGTTATCGTCAAGGTGCAGGGCTTGGGCTCTCCATTAGCCGTCAATTGATCGAATTAATGGGAGGCTCGTTATACGTCAG
TAGCCAACCAATGGTCGGAACTACCTTCAGTTTCACTTTACCGCTCGCCAGTGAAGAAGAAATCCAAGCAACCCAGACTC
TAGCTGCGCACGGACACTTCCAAATCCCTGAAGTTAATGTAGAGAACAGTGAAGACTTATCACTTCCAGAGAACCCAGAC
GGCCCGTTACTGTATGTTGCTGACGATGAACCAGTAAACTTACGCGTGCTTGAAAGCTTTTTACGTTTAGAGGGCTATCG
TGTGCGTACCGTCTCCGATGGGCCAGAAACATTAGCGCTCGTCGAGCAAGAGAAGCCGGAACTTCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTTTGTAGTGAACTACGTGAAACCTATGATCATGCCGAGTTGCCAATCATTATG
CTCACCGCACTCAGTCAAACAGAAGATCGTGTAAGAGGTTTTGAGGCAGGAGCCAACGACTATTTATCGAAACCATTTAA
TAAACAAGAGTTGGCGGCACGTATCCAAGCGCATTTAACGGCAAGTAAAGCAGAAATGCGCCATATGGAAAACAAAGTGC
TAGAGTCTGAACTTAGACAGCGTGCAGTCGTTGAAGCAAGCTTACTTGAGACTCAAGGTCGTTTGTTGGAACAGCTAGAA
TCGGCTCCTGAAGCTATCATCTGTCTACGTGAAGACAAGCGTATTCGCTTTGCTAACGAAGCTGCTTGTAAGCTATTCAA
GCGCAGCTTAGAACAGCTAAAACGCTCATCTGCTGATGAGCTGATTGCCCCTAAATATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAGAACATCGAAGCAGACATTCTTAAGCTCCCTGAAGGTTCA
GGGTTAGATATCATGTACATCTTTAATGTCGGCGGTGGAGCCAGTGCCGCTCGCATACATAATCTAGAAACCGCCGTAGA
AGTGCTTTCAAGTTATGCATTTGATGGTGACAAAGACCAATTGCAAAAGCTAAAAGAGCTTGGCGGAGAATTTACGCGCC
TTGCAGACAAAGCGCTCGGTAATAAAAAAGACAAGCAAGAACTTATGCGAGAAGTTCTAGTAGACGCAATGACACATGCT
TTAGAGTATTGGGAATCTGTAACGGGTGAAAGTAAGTTCGCATTTGCAGAGCAAAGTGGCTTGTGGCGCGTTTATCTAGA
CCGTAGTACTTTGCAAACACGCACTTTAGATAAATACATGCGCATAGAAACATTACCCAAAACACCACGTTGGAGAACGG
TGCTAAGCTCGATAGAGTTCATTCTCGAACACTGCAAAGAACAGAGCCCCGAGAGAGCATACATAGAAGCACAACGAGAT
AAACTACAGCGACTATTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (876-924)

• Response regulator receiver domain (Response_reg) (726-836)

3D structure

• AlphaFold DB: A0A2I3C928

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765