Detailed information NTG0186339

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BAU10_RS00295
• Genome accession: NZ_CP016224
• Coordinates: 60230..61258 (-)
• Length: 342 a.a.
• NCBI ID: WP_257739454.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain ZJ-T
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 55230..66258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAU10_RS00265 (BAU10_00265)	zapB	55248..55490 (+)	243	WP_005379536.1	cell division protein ZapB	-
BAU10_RS00270 (BAU10_00270)	rraA	55626..56132 (-)	507	WP_005397954.1	ribonuclease E activity regulator RraA	-
BAU10_RS00275 (BAU10_00275)	-	56209..57126 (-)	918	WP_065274112.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BAU10_RS00280 (BAU10_00280)	hslU	57435..58766 (-)	1332	WP_005397950.1	HslU--HslV peptidase ATPase subunit	-
BAU10_RS00285 (BAU10_00285)	hslV	58790..59341 (-)	552	WP_005383176.1	ATP-dependent protease subunit HslV	-
BAU10_RS00290 (BAU10_00290)	ftsN	59457..60005 (-)	549	WP_031780671.1	cell division protein FtsN	-
BAU10_RS00295 (BAU10_00295)	cytR	60230..61258 (-)	1029	WP_257739454.1	DNA-binding transcriptional regulator CytR	Regulator
BAU10_RS00300 (BAU10_00300)	priA	61562..63763 (-)	2202	WP_065274114.1	primosomal protein N'	-
BAU10_RS00305 (BAU10_00305)	rpmE	64048..64269 (+)	222	WP_005379546.1	50S ribosomal protein L31	-
BAU10_RS00310 (BAU10_00310)	rpsJ	64725..65036 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
BAU10_RS00315 (BAU10_00315)	rplC	65051..65680 (+)	630	WP_005379555.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37751.39 Da
• Isoelectric Point: 6.2464

>NTDB_id=186339 BAU10_RS00295 WP_257739454.1 60230..61258(-) (cytR) [Vibrio alginolyticus strain ZJ-T]
MNERLKTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPY
FSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELEL
PTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAILCQFRQQGYQQALRRAGINKDPQYSVITEFSFDGGAKAVRKLLE
LPEPPTAIFCHCDTMAIGAIQEAKNLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLEMLKGHDVH
SGSRLLETNLVIRGSAAPPQRP

Nucleotide

• Length: 1029 bp

>NTDB_id=186339 BAU10_RS00295 WP_257739454.1 60230..61258(-) (cytR) [Vibrio alginolyticus strain ZJ-T]
ATAAACGAGAGGTTAAAAACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACGGCTACGGTATCTCG
AGCATTAATGAACCCAGAGAAGGTCTCTTCTTCAACGAGAAAAAGAGTAGAAGATGCCGTACTTGAAGCGGGTTATTCTC
CAAACTCATTAGCGCGTAACTTACGTAGAAACGAATCAAAAACCATTGTCACTATCGTTCCCGACATCTGTGATCCTTAT
TTTTCTGAAATTATTCGCGGCATTGAAGATGCTGCCATGGAACATGGCTATCTAGTCCTGCTGGGCGATAGCGGACAACA
GAAGAAACGCGAAAGTTCTTTCGTTAACCTCGTATTTACTAAGCAGGCGGATGGAATGCTACTGCTTGGCACAGATCTAC
CGTTCGATGTCAGTAAGCCAGAACAAAAGAACTTACCTCCGATGGTAATGGCGTGTGAATTTGCGCCAGAGTTAGAACTT
CCGACAGTACATATTGACAACCTGACCTCAGCATTTGAAGCGGTGAATTACCTAACCCAACTAGGTCATAAACGCATCGC
GCAAATCTCGGGGCCAGATACGGCAATATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGCCGCGCAGGCA
TCAATAAAGATCCTCAATATAGTGTCATTACTGAGTTCTCTTTTGATGGCGGAGCAAAAGCCGTTCGTAAACTGCTCGAA
TTGCCTGAGCCACCAACGGCTATTTTCTGTCACTGTGACACAATGGCCATCGGCGCAATTCAAGAAGCGAAAAATCTTGG
CTTACGAGTACCGCAAGATCTCTCCGTTGTGGGCTTTGATGACATTAACTTCGCTCAGTACTGCGATCCACCGTTGACCA
CTATCTCTCAGCCTCGCTATGAGATTGGTCGACAAGCGATGCTAATGATGCTTGAGATGTTAAAAGGACACGACGTGCAT
TCAGGCTCGCGCCTACTTGAAACTAACCTCGTCATTCGCGGAAGCGCAGCGCCACCACAGCGCCCTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-335)

• Bacterial regulatory proteins, lacI family (LacI) (10-55)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	97.935	99.123	0.971
cytR	Vibrio cholerae C6706	89.521	97.661	0.874