Detailed information NTG0186330

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: A4W79_RS08935
• Genome accession: NZ_CP016221
• Coordinates: 1724662..1725369 (+)
• Length: 235 a.a.
• NCBI ID: WP_081394487.1
• Uniprot ID: A0A385ABK3
• Organism: Latilactobacillus curvatus strain TMW 1.421
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1719662..1730369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W79_RS08915 (A4W79_08835)	rsgA	1719921..1720676 (+)	756	WP_256498067.1	ribosome small subunit-dependent GTPase A	-
A4W79_RS08920 (A4W79_08840)	fusA	1721239..1723326 (-)	2088	WP_004270213.1	elongation factor G	-
A4W79_RS08925 (A4W79_08845)	rpsG	1723418..1723888 (-)	471	WP_076786307.1	30S ribosomal protein S7	-
A4W79_RS08930 (A4W79_08850)	rpsL	1723978..1724391 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
A4W79_RS08935	comC	1724662..1725369 (+)	708	WP_081394487.1	prepilin peptidase	Machinery gene
A4W79_RS08940 (A4W79_08860)	rpoC	1725442..1729083 (-)	3642	WP_076786309.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26588.96 Da
• Isoelectric Point: 6.9090

>NTDB_id=186330 A4W79_RS08935 WP_081394487.1 1724662..1725369(+) (comC) [Latilactobacillus curvatus strain TMW 1.421]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGCTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLRHPVVLALVGHRPIPFVPYISYGVLIVLFIVNT

Nucleotide

• Length: 708 bp

>NTDB_id=186330 A4W79_RS08935 WP_081394487.1 1724662..1725369(+) (comC) [Latilactobacillus curvatus strain TMW 1.421]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGTCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGCTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTACTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCTATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCTGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATCGATAGTCTCCGCCATCCAGTTGTCCTCGCCTTAGTCGGACACC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (102-195)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

3D structure

• AlphaFold DB: A0A385ABK3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489