Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   A6J51_RS03485 Genome accession   NZ_CP020423
Coordinates   590531..591790 (-) Length   419 a.a.
NCBI ID   WP_002258293.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_212     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 585531..596790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J51_RS03455 (A6J51_13255) - 585836..585985 (-) 150 WP_033908890.1 hypothetical protein -
  A6J51_RS03460 (A6J51_03345) - 586003..586200 (-) 198 WP_002218528.1 hypothetical protein -
  A6J51_RS03465 (A6J51_03350) - 586211..587227 (-) 1017 WP_002215314.1 lysozyme inhibitor LprI family protein -
  A6J51_RS03470 (A6J51_03355) gltS 587326..588540 (-) 1215 WP_002216198.1 sodium/glutamate symporter -
  A6J51_RS03480 (A6J51_03360) - 588758..590164 (-) 1407 WP_002224757.1 tetratricopeptide repeat protein -
  A6J51_RS03485 (A6J51_03365) kpsS 590531..591790 (-) 1260 WP_002258293.1 capsule biosynthesis protein Regulator
  A6J51_RS03490 (A6J51_03370) - 591927..594041 (-) 2115 WP_080610990.1 capsular polysaccharide biosynthesis protein -
  A6J51_RS03495 (A6J51_03375) rfbC 594065..594604 (-) 540 WP_080610992.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  A6J51_RS03500 (A6J51_03380) rfbA 594649..595515 (-) 867 WP_080610994.1 glucose-1-phosphate thymidylyltransferase RfbA -
  A6J51_RS03505 (A6J51_03385) rfbB 595578..596645 (-) 1068 WP_080610996.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48662.47 Da        Isoelectric Point: 8.6667

>NTDB_id=186231 A6J51_RS03485 WP_002258293.1 590531..591790(-) (kpsS) [Neisseria meningitidis strain FDAARGOS_212]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELQGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSDSSTPAT

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=186231 A6J51_RS03485 WP_002258293.1 590531..591790(-) (kpsS) [Neisseria meningitidis strain FDAARGOS_212]
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCGATGGACCGCGGTTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCCAAGGCCGTGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGTATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCTAACAAAAAAACCTCCGACTCTTCCACTCCAGCAACCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

38.579

94.033

0.363