Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   dqs_RS17730 Genome accession   NZ_CP016210
Coordinates   3873293..3873679 (+) Length   128 a.a.
NCBI ID   WP_011767175.1    Uniprot ID   A1KB63
Organism   Azoarcus olearius strain DQS-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3868293..3878679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  dqs_RS17705 (dqs_3591) pepA 3869288..3870106 (+) 819 WP_169823527.1 flocculation-associated PEP-CTERM protein PepA -
  dqs_RS17710 (dqs_3592) hemL 3870116..3871390 (-) 1275 WP_065341286.1 glutamate-1-semialdehyde 2,1-aminomutase -
  dqs_RS17715 (dqs_3593) thiE 3871466..3872086 (-) 621 WP_065341287.1 thiamine phosphate synthase -
  dqs_RS17720 (dqs_3594) thiD 3872079..3872921 (-) 843 WP_011767173.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  dqs_RS17725 (dqs_3595) - 3873060..3873212 (+) 153 WP_269147345.1 rubredoxin -
  dqs_RS17730 (dqs_3596) pilG 3873293..3873679 (+) 387 WP_011767175.1 twitching motility response regulator PilG Regulator
  dqs_RS17735 (dqs_3597) - 3873703..3874068 (+) 366 WP_011767176.1 response regulator -
  dqs_RS17740 (dqs_3598) - 3874076..3874588 (+) 513 WP_065341288.1 chemotaxis protein CheW -
  dqs_RS17745 (dqs_3599) - 3874640..3876760 (+) 2121 WP_011767178.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14033.31 Da        Isoelectric Point: 7.1333

>NTDB_id=186200 dqs_RS17730 WP_011767175.1 3873293..3873679(+) (pilG) [Azoarcus olearius strain DQS-4]
MDLTGLKVMVIDDSNTIRRSAEIFLGQAGCQVLLAEDGFDALAKITDHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATYTGRAPA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=186200 dqs_RS17730 WP_011767175.1 3873293..3873679(+) (pilG) [Azoarcus olearius strain DQS-4]
ATGGATCTGACCGGCCTCAAGGTCATGGTCATCGATGACAGCAATACGATCCGGCGCAGCGCCGAGATCTTCCTGGGCCA
GGCCGGGTGTCAGGTCCTGCTTGCGGAAGACGGCTTTGACGCACTCGCCAAGATCACCGACCACCACCCCGACGTCATCT
TCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACCCGCGCCTGTCAGCCACC
CCGGTCATCATGCTGTCGTCAAAGGACGGCCTCTTCGACCGCGCCCGCGGGCGCATGGTCGGGTCCGACGAGTACCTCAC
CAAGCCCTTCACGAAGGACAGCCTGCTCAAGGCGGTTGCCACCTATACCGGCCGCGCACCGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KB63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.574

95.313

0.625

Multiple sequence alignment