Detailed information NTG0186186

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: dqs_RS04135
• Genome accession: NZ_CP016210
• Coordinates: 866818..867966 (+)
• Length: 382 a.a.
• NCBI ID: WP_065339745.1
• Uniprot ID: -
• Organism: Azoarcus olearius strain DQS-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 861818..872966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
dqs_RS04110 (dqs_0836)	-	862552..862809 (-)	258	WP_011764495.1	YfhL family 4Fe-4S dicluster ferredoxin	-
dqs_RS04115 (dqs_0837)	coaD	862826..863317 (-)	492	WP_011764496.1	pantetheine-phosphate adenylyltransferase	-
dqs_RS04120 (dqs_0838)	rsmD	863314..863853 (-)	540	WP_065339744.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
dqs_RS04125 (dqs_0839)	-	863850..865202 (-)	1353	WP_011764498.1	M16 family metallopeptidase	-
dqs_RS04130 (dqs_0840)	-	865231..866622 (-)	1392	WP_065341635.1	M16 family metallopeptidase	-
dqs_RS04135 (dqs_0841)	pilA	866818..867966 (+)	1149	WP_065339745.1	signal recognition particle-docking protein FtsY	Machinery gene
dqs_RS04140 (dqs_0842)	-	867963..868622 (+)	660	WP_065339746.1	cell division ATP-binding protein FtsE	-
dqs_RS04145 (dqs_0843)	ftsX	868619..869515 (+)	897	WP_065339747.1	permease-like cell division protein FtsX	-
dqs_RS04150 (dqs_0844)	ahpC	869709..870272 (+)	564	WP_011764503.1	alkyl hydroperoxide reductase subunit C	-
dqs_RS04155 (dqs_0845)	ahpF	870402..871955 (+)	1554	WP_011764504.1	alkyl hydroperoxide reductase subunit F	-
dqs_RS04165 (dqs_0847)	-	872332..872730 (+)	399	WP_232502217.1	hypothetical protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39986.81 Da
• Isoelectric Point: 6.5093

>NTDB_id=186186 dqs_RS04135 WP_065339745.1 866818..867966(+) (pilA) [Azoarcus olearius strain DQS-4]
MFGFFKKSGKPEPAGRDPQPASPSAEQAPAIAADAPVAAPAPISPAPAQSVPAQPVTAPAEPAAAPKLSWGERLKAGLAR
TRQQLGGGLANLFGRRKIDEDLLEELETTLLMADCGVDATQYLLDELRLSWKRDRLETADQLQAALADALHKIIAPLEQP
LDVSGHKPYIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQDGGDAAAVIFD
AINAARARGIDIVLADTAGRLPTQLHLMEEIAKVRRVIAKADASGPHEVVLVLDANIGQNALAQVKAFDAAIGVTGLVVT
KLDGTAKGGVVAAIARQCPKPLRFIGVGEGIDDLQPFKAREFIDALFEPSPSGATKRGDASA

Nucleotide

• Length: 1149 bp

>NTDB_id=186186 dqs_RS04135 WP_065339745.1 866818..867966(+) (pilA) [Azoarcus olearius strain DQS-4]
ATGTTTGGTTTCTTCAAGAAGTCCGGCAAGCCCGAACCTGCCGGGCGCGATCCGCAGCCCGCGTCGCCGTCTGCGGAGCA
GGCCCCGGCGATCGCTGCCGACGCGCCCGTCGCTGCTCCCGCGCCGATTTCGCCCGCCCCGGCCCAGTCCGTCCCGGCCC
AGCCCGTCACTGCGCCCGCCGAGCCGGCGGCCGCACCCAAGCTTTCCTGGGGCGAACGCCTCAAGGCCGGCCTGGCGCGC
ACGCGCCAGCAGCTCGGCGGGGGGCTGGCCAACCTGTTCGGGCGCCGCAAGATCGACGAGGATCTGCTCGAAGAGCTGGA
AACGACCCTGTTGATGGCGGACTGCGGTGTCGACGCCACCCAGTATCTGCTCGATGAACTGCGTCTGAGCTGGAAGCGCG
ACCGGCTGGAAACCGCCGACCAGTTGCAGGCGGCGTTGGCCGATGCGCTGCACAAGATCATCGCGCCGCTGGAGCAGCCG
CTGGACGTGTCCGGTCACAAGCCCTACATCATCATGATCGCGGGGGTGAATGGCTCGGGCAAGACGACCTCGATCGGCAA
GCTTGCCAAGTATTTCCAGGCCCAGGGCAAGAGCGTGCTGCTGGCGGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGC
AGCTGATGACCTGGGGCGAGCGCAACAACGTCACCGTGATCGCTCAGGACGGCGGCGATGCGGCCGCGGTGATCTTCGAT
GCGATCAATGCCGCCCGTGCGCGCGGCATCGACATCGTACTCGCCGACACCGCGGGCCGGCTGCCCACGCAACTGCACCT
GATGGAGGAGATCGCCAAGGTGCGGCGCGTGATCGCCAAGGCGGATGCCAGCGGCCCGCACGAGGTCGTGCTGGTGCTGG
ACGCCAACATCGGCCAGAACGCGCTGGCACAGGTCAAGGCCTTCGATGCCGCGATCGGCGTCACCGGCCTGGTCGTCACC
AAGCTCGACGGCACCGCGAAAGGCGGGGTCGTCGCGGCGATCGCGCGCCAGTGCCCCAAGCCGCTACGCTTCATTGGCGT
GGGCGAGGGCATCGACGACCTGCAGCCGTTCAAGGCCCGCGAGTTCATCGATGCCTTGTTCGAGCCGTCCCCCTCGGGGG
CGACCAAGCGCGGCGACGCCTCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (85-150)

• SRP54-type protein, GTPase domain (SRP54) (169-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	65.017	79.319	0.516