Detailed information NTG0186083

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: A6E01_RS10440
• Genome accession: NZ_CP016177
• Coordinates: 2264917..2268315 (+)
• Length: 1132 a.a.
• NCBI ID: WP_065210185.1
• Uniprot ID: A0AAN1CSJ9
• Organism: Vibrio breoganii strain FF50
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2259917..2273315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6E01_RS10420 (A6E01_10420)	erpA	2260754..2261095 (-)	342	WP_017028370.1	iron-sulfur cluster insertion protein ErpA	-
A6E01_RS10425 (A6E01_10425)	hemL	2261294..2262580 (+)	1287	WP_017028371.1	glutamate-1-semialdehyde 2,1-aminomutase	-
A6E01_RS10430 (A6E01_10430)	-	2262696..2263781 (+)	1086	WP_065210183.1	AI-2E family transporter	-
A6E01_RS10435 (A6E01_10435)	rsmC	2263795..2264814 (+)	1020	WP_065210184.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
A6E01_RS10440 (A6E01_10440)	chiS	2264917..2268315 (+)	3399	WP_065210185.1	response regulator	Regulator
A6E01_RS10445 (A6E01_10445)	-	2268914..2270587 (+)	1674	WP_017242574.1	ABC transporter substrate-binding protein	-
A6E01_RS10450 (A6E01_10450)	-	2270735..2271721 (+)	987	WP_017028376.1	ABC transporter permease	-
A6E01_RS10455 (A6E01_10455)	-	2271723..2272751 (+)	1029	WP_017028377.1	ABC transporter permease	-

Sequence

Protein

• Length: 1132 a.a.
• Molecular weight: 128108.72 Da
• Isoelectric Point: 4.7998

>NTDB_id=186083 A6E01_RS10440 WP_065210185.1 2264917..2268315(+) (chiS) [Vibrio breoganii strain FF50]
MSKNHTRPKFKRLQSTLMGAFMLVSLIPMLLVAFFFLRSHTQDLQEQSTTYLTSMRDGNANKVTAYIGNLDSEVIGFVHS
ELAYASGGRFYGLIDSFRRLGKDLDESRSIGQQRYIPGSGNAIRTKTVRGNENYTSVERYRLLHKRYHSTFQSLLERSDF
DDIALVDLEGNVAYSVQKYDYYATNLNSERYKKTELGGLFKQLKDYVASNKDSLEQYNDIVLMSDFSIDGNSDSTEEVAW
FAAPIVQRGYLHSYAFFRLPLSALTDLISEEHLVNLNVSLFDKSLKLLADSSEGVDSKQSSPVAIKALEGSAEVETYANL
SGDNTIAAYAPIDVHGLTWAVVVETPEEIAFERVNQLFKLFFIIVLSAAVIVVITSHYLSNFITNPLLKLTWAAERISAG
DLKENVEGTERKDEIGRLAVSFERMQRSIREKIELIKEQNKELEFNLDTIATQNGELQLADKLKDEFLATTSHELRTPLH
GMIGVAQAMLSEAHGSVPPSQKYQLEIIINSGHRLSNLVDDLLDYHKMQYGHLQLEPTAVSLSSASQLVVELSKHLVDKK
PVRIINQIDSSLPMVSADPQRLEQVLYNLVGNAIKFTSEGKVILNADQQGEQLRIQVIDTGHGIPKEDLDNIFEPLTQSN
YSGYHQGTGLGLSISKRLIEIMRGELTVTSQPMLGTTFTMTLPLASKQELETFNSESDTEHYSREEFHQTEFDEQSLSLP
NNPDGKLVMIADDEPVNLKILESFLRVEGYRVVSAHNGREVLDLIGEEKPDILLLDIMMPELSGFQVCEYLRNQYNYNEL
PIIMLTALNQTEDKVKGFDCGANDYLVKPFNKQELSARIQVHINASLSERRKQENDSLSAELTQRERVESLLLETQTKLL
EQLESTPEAIVCINENHKITFANKSATELLKRSIEQIKRSQIEEFIAPKYLQFDQPHRSMDIDVFVGETKQVIASDIFTL
PLETGLRGMIIFNSDPDDANQRINNLEVALDALASYAFAGDKSQLEELKELGDEFADLVGQLDNSKDSKQQNMRQLLVDC
MSSALEYWESHDGNTKFNFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSLDFILAHSNHDDAQRAQLL
ELREQLQNLVAQ

Nucleotide

• Length: 3399 bp

>NTDB_id=186083 A6E01_RS10440 WP_065210185.1 2264917..2268315(+) (chiS) [Vibrio breoganii strain FF50]
ATGTCAAAAAATCACACTCGCCCAAAGTTTAAACGTCTGCAAAGCACCCTTATGGGCGCCTTTATGCTGGTCAGCCTTAT
TCCTATGCTGCTGGTTGCTTTCTTCTTTCTTCGTTCCCACACTCAAGACCTCCAAGAGCAAAGCACCACGTATCTAACCT
CGATGAGGGATGGCAATGCTAATAAGGTTACCGCTTATATCGGCAATCTCGACTCAGAGGTGATTGGTTTTGTGCATTCG
GAACTGGCTTACGCCAGTGGTGGACGATTTTATGGGTTGATTGACTCTTTCAGGCGCTTAGGTAAAGACTTAGACGAGTC
TAGAAGCATTGGCCAACAGAGATACATTCCAGGCTCTGGAAATGCCATTCGTACGAAAACCGTCAGAGGCAATGAAAACT
ACACCAGTGTTGAGCGCTACCGATTACTGCACAAGCGCTATCATTCTACCTTCCAAAGTTTGTTAGAGCGCTCGGACTTC
GACGATATCGCCTTGGTTGATCTTGAAGGCAACGTCGCCTATTCCGTGCAAAAATACGATTACTACGCAACGAACCTGAA
TTCAGAGCGCTACAAGAAAACCGAACTGGGTGGGCTATTCAAACAACTCAAAGACTACGTCGCCTCAAACAAAGACTCCT
TAGAACAATACAATGACATCGTTCTGATGAGCGACTTTTCTATTGACGGTAACTCTGACAGCACAGAGGAAGTGGCTTGG
TTTGCCGCCCCGATTGTGCAAAGAGGCTACTTACACAGCTACGCATTTTTCCGACTTCCACTGTCTGCGCTCACAGACCT
TATCTCAGAGGAGCATCTGGTTAACCTGAATGTATCCTTGTTTGATAAGTCTTTAAAACTACTCGCAGACAGTAGCGAGG
GCGTTGATTCAAAGCAAAGCTCCCCGGTCGCCATAAAGGCCCTTGAGGGTTCTGCCGAGGTTGAAACGTACGCCAACTTA
TCTGGCGACAATACCATCGCAGCCTACGCGCCTATCGATGTGCATGGCCTAACATGGGCAGTGGTGGTTGAGACCCCAGA
AGAAATCGCATTTGAGCGAGTAAATCAGCTATTTAAGCTGTTTTTTATCATTGTATTAAGCGCTGCTGTTATCGTAGTGA
TCACCTCTCACTACCTATCGAACTTCATAACCAACCCTCTGCTTAAGCTTACCTGGGCCGCAGAGCGAATCTCGGCTGGC
GACCTTAAAGAAAATGTAGAGGGCACTGAGCGCAAGGATGAGATAGGACGACTTGCAGTCAGCTTTGAGAGGATGCAACG
TTCAATTCGAGAAAAGATTGAGTTGATCAAAGAGCAGAACAAAGAACTCGAGTTCAACCTAGATACCATCGCCACACAAA
ATGGTGAATTGCAGCTAGCGGATAAACTAAAAGATGAATTTTTGGCTACCACCTCTCATGAGCTAAGAACCCCACTACAC
GGCATGATTGGCGTCGCCCAAGCTATGCTCAGTGAGGCGCATGGAAGCGTGCCACCATCTCAAAAATATCAGCTAGAGAT
CATCATCAATAGTGGACACAGATTGTCCAACCTAGTGGATGATCTTTTGGATTATCATAAGATGCAATATGGCCATTTGC
AGCTTGAACCTACTGCGGTTTCACTGTCGTCTGCATCTCAATTGGTTGTGGAATTATCAAAACACTTAGTCGATAAAAAA
CCCGTTCGCATCATCAATCAAATAGACAGCAGCTTGCCTATGGTCAGCGCCGATCCACAAAGGCTTGAGCAAGTGCTGTA
CAACCTTGTTGGCAACGCAATCAAGTTCACCTCAGAAGGTAAGGTGATCTTAAACGCAGATCAGCAAGGCGAACAGCTAA
GAATACAGGTCATAGATACCGGACATGGCATCCCTAAAGAAGACCTAGACAATATCTTCGAGCCACTGACTCAAAGCAAT
TATTCTGGCTACCATCAAGGTACTGGTCTTGGGTTATCTATCAGTAAGCGCTTGATTGAAATCATGCGCGGTGAACTGAC
TGTGACTAGCCAACCTATGCTCGGCACTACCTTTACCATGACCCTGCCACTTGCGAGCAAGCAAGAGCTTGAAACCTTTA
ATAGTGAATCAGACACAGAGCACTACTCTCGTGAGGAGTTTCATCAAACCGAGTTTGATGAACAGTCTCTCTCTTTGCCC
AATAATCCAGACGGAAAACTCGTCATGATTGCGGATGACGAACCCGTTAACCTCAAGATACTGGAGAGTTTCTTGCGAGT
AGAAGGGTATAGGGTGGTGAGTGCACATAATGGTCGAGAGGTGCTCGACCTCATTGGCGAAGAAAAGCCCGATATTCTGC
TGCTGGATATCATGATGCCAGAATTGAGCGGATTCCAAGTTTGTGAGTACTTACGTAATCAGTACAACTACAACGAGCTG
CCAATCATCATGCTCACCGCCTTGAATCAAACAGAGGACAAAGTGAAGGGCTTTGACTGTGGCGCTAATGATTACCTAGT
TAAGCCCTTTAATAAGCAAGAGCTATCAGCACGAATTCAGGTGCACATAAATGCCAGTCTCTCGGAAAGGCGCAAGCAGG
AAAACGACTCATTGAGCGCTGAGCTAACCCAACGTGAAAGGGTTGAGTCTTTACTTTTGGAAACGCAAACCAAGCTTCTC
GAGCAGCTAGAGAGCACTCCAGAGGCGATTGTTTGTATCAATGAGAACCACAAGATCACCTTTGCCAACAAATCTGCGAC
TGAGCTTCTCAAGCGCTCTATTGAGCAGATTAAGCGCTCACAGATTGAAGAGTTCATCGCGCCTAAGTACCTACAGTTTG
ATCAGCCTCACCGAAGCATGGATATCGATGTCTTCGTAGGTGAAACCAAGCAGGTCATTGCCAGCGATATCTTTACCTTG
CCGTTGGAAACGGGCCTGCGAGGCATGATTATCTTCAATTCAGACCCAGATGACGCTAACCAACGCATCAACAACCTTGA
AGTGGCGCTAGATGCCTTAGCCAGTTACGCGTTTGCTGGAGATAAGTCCCAACTGGAAGAGCTCAAAGAGCTTGGCGATG
AGTTTGCAGACTTGGTTGGACAGTTGGATAACAGCAAGGACAGCAAGCAGCAGAATATGCGACAGCTTCTTGTAGACTGT
ATGTCATCCGCACTTGAATATTGGGAAAGCCATGACGGTAATACTAAATTCAATTTTGCTGAACAAAGTGGCCTGTGGCG
TGTTTATCTTGATAGAAGCACCTTGCAGACAAGAACGCTAGACAAATACTTAAGGGTAGAAACTCTGCCTAAAACGCCTC
GCTGGCGTACCGTTCTCAATTCCTTAGACTTTATTCTTGCGCACTCTAATCACGATGATGCGCAGCGAGCACAGCTGCTT
GAATTAAGAGAGCAATTACAGAACTTAGTCGCACAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (728-840)

• His Kinase A (phospho-acceptor) domain (HisKA) (464-530)

• PAS fold (PAS) (881-929)

• HAMP domain (HAMP) (379-431)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (578-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.664	100	0.567