Detailed information NTG0185740

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: A6J38_RS03155
• Genome accession: NZ_CP020411
• Coordinates: 615454..616875 (-)
• Length: 473 a.a.
• NCBI ID: WP_005693979.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain FDAARGOS_199
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 610454..621875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J38_RS03135 (A6J38_03135)	pstA	611074..611922 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
A6J38_RS03140 (A6J38_03140)	pstB	611932..612699 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
A6J38_RS03145 (A6J38_03145)	phoB	612794..613489 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
A6J38_RS03150 (A6J38_03150)	phoR	613486..614763 (+)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
A6J38_RS03155 (A6J38_03155)	sbcB	615454..616875 (-)	1422	WP_005693979.1	exodeoxyribonuclease I	Machinery gene
A6J38_RS03160 (A6J38_03160)	-	616888..617763 (-)	876	WP_005693980.1	hypothetical protein	-
A6J38_RS03165 (A6J38_03165)	-	617766..618674 (-)	909	WP_005693981.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54391.78 Da
• Isoelectric Point: 5.1962

>NTDB_id=185740 A6J38_RS03155 WP_005693979.1 615454..616875(-) (sbcB) [Haemophilus influenzae strain FDAARGOS_199]
MVKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANSIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFEASLQRLVEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=185740 A6J38_RS03155 WP_005693979.1 615454..616875(-) (sbcB) [Haemophilus influenzae strain FDAARGOS_199]
ATGGTAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGCGAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTAACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTACGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTCATTGATCCTTATGAATACAGCTGGAAAAACGGAAATTCACGCTGGGATTTGT
TAGATTTAGTACGGGCCTGTTATGCCTTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATAGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGAGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAACCAAAACGCATTAATTGTGTGTGATTTAACTGGTGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGAGCAGATTTATATACAAAAAAATTGGAATTAGAAGAAAGGGGAGTTTCATCCG
TTCCGTTAAAACTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGTCAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAAGCAAGTTTACAACGTTTAGTAGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (9-188)

• Exonuclease C-terminal (ExoI_SH3) (208-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.579	98.52	0.548