Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   A9P84_RS12980 Genome accession   NZ_CP016030
Coordinates   2912067..2913329 (+) Length   420 a.a.
NCBI ID   WP_010948208.1    Uniprot ID   Q5ZSL1
Organism   Legionella pneumophila strain OLDA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2907067..2918329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9P84_RS12970 (A9P84_12965) ceg32 2907941..2910769 (+) 2829 WP_015961653.1 Dot/Icm T4SS effector Ceg32/SidI -
  A9P84_RS12975 (A9P84_12970) mesI 2910771..2911661 (+) 891 WP_080020089.1 Dot/Icm T4SS effector metaeffector MesI -
  A9P84_RS12980 (A9P84_12975) lqsT 2912067..2913329 (+) 1263 WP_010948208.1 sensor histidine kinase Regulator
  A9P84_RS12985 (A9P84_12980) - 2913377..2914072 (-) 696 WP_015961655.1 iron-containing redox enzyme family protein -
  A9P84_RS12990 (A9P84_12985) sdjA 2914469..2916892 (-) 2424 WP_015961656.1 Dot/Icm T4SS effector SdjA -
  A9P84_RS12995 (A9P84_12990) dupB 2916964..2918157 (-) 1194 WP_080020090.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48657.07 Da        Isoelectric Point: 7.9744

>NTDB_id=185545 A9P84_RS12980 WP_010948208.1 2912067..2913329(+) (lqsT) [Legionella pneumophila strain OLDA]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=185545 A9P84_RS12980 WP_010948208.1 2912067..2913329(+) (lqsT) [Legionella pneumophila strain OLDA]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCGACTCTTTGGCTAATGAATTGCGTATCTGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCGGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGCGCCTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCCGAATTACAGGAATTGATTGTTGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAAGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGCCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZSL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

100

100

1


Multiple sequence alignment