Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   A9P84_RS06825 Genome accession   NZ_CP016030
Coordinates   1500618..1500959 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain OLDA     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1495618..1505959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9P84_RS06800 (A9P84_06795) acpP 1496447..1496695 (+) 249 WP_003631752.1 acyl carrier protein -
  A9P84_RS06805 (A9P84_06800) fabF 1496715..1497953 (+) 1239 WP_011213689.1 beta-ketoacyl-ACP synthase II -
  A9P84_RS06810 (A9P84_06805) mltG 1497954..1498952 (+) 999 WP_011213690.1 endolytic transglycosylase MltG -
  A9P84_RS06815 (A9P84_06810) tmk 1498952..1499590 (+) 639 WP_011213691.1 dTMP kinase -
  A9P84_RS06820 (A9P84_06815) - 1499587..1500492 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  A9P84_RS06825 (A9P84_06820) pilZ 1500618..1500959 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  A9P84_RS06830 (A9P84_06825) - 1501019..1501807 (+) 789 WP_011213694.1 TatD family hydrolase -
  A9P84_RS06835 (A9P84_06830) - 1501919..1503019 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  A9P84_RS06840 (A9P84_06835) - 1503075..1504367 (+) 1293 WP_011213696.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=185525 A9P84_RS06825 WP_025519545.1 1500618..1500959(+) (pilZ) [Legionella pneumophila strain OLDA]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=185525 A9P84_RS06825 WP_025519545.1 1500618..1500959(+) (pilZ) [Legionella pneumophila strain OLDA]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment