Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   A6J53_RS03755 Genome accession   NZ_CP020401
Coordinates   592639..593898 (+) Length   419 a.a.
NCBI ID   WP_002233385.1    Uniprot ID   P57038
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 587639..598898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS03735 (A6J53_03645) rfbB 587764..588831 (+) 1068 WP_082301609.1 dTDP-glucose 4,6-dehydratase -
  A6J53_RS03740 (A6J53_03650) rfbA 588894..589760 (+) 867 WP_082301610.1 glucose-1-phosphate thymidylyltransferase RfbA -
  A6J53_RS03745 (A6J53_03655) rfbC 589814..590353 (+) 540 WP_002251782.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  A6J53_RS03750 (A6J53_03660) - 590388..592502 (+) 2115 WP_002256279.1 capsular polysaccharide biosynthesis protein -
  A6J53_RS03755 (A6J53_03665) kpsS 592639..593898 (+) 1260 WP_002233385.1 capsule biosynthesis protein Regulator
  A6J53_RS03760 (A6J53_03670) - 594268..595674 (+) 1407 WP_002224757.1 tetratricopeptide repeat protein -
  A6J53_RS03765 (A6J53_03675) gltS 595892..597106 (+) 1215 WP_002216198.1 sodium/glutamate symporter -
  A6J53_RS03770 (A6J53_03680) - 597205..598221 (+) 1017 WP_002256280.1 lysozyme inhibitor LprI family protein -
  A6J53_RS03775 (A6J53_03685) - 598232..598429 (+) 198 WP_002215316.1 hypothetical protein -
  A6J53_RS03780 (A6J53_14195) - 598447..598596 (+) 150 WP_017629096.1 hypothetical protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48694.51 Da        Isoelectric Point: 8.6667

>NTDB_id=185523 A6J53_RS03755 WP_002233385.1 592639..593898(+) (kpsS) [Neisseria meningitidis strain FDAARGOS_214]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNLRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKNTSDSSTPTT

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=185523 A6J53_RS03755 WP_002233385.1 592639..593898(+) (kpsS) [Neisseria meningitidis strain FDAARGOS_214]
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCTACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTGCAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCGATGGACCGCGGTTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGCGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTCACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGCATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCTAACAAAAACACATCCGACTCTTCCACACCAACAACCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P57038

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

38.579

94.033

0.363


Multiple sequence alignment