Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | A9P85_RS03410 | Genome accession | NZ_CP016029 |
| Coordinates | 729742..730449 (-) | Length | 235 a.a. |
| NCBI ID | WP_014841117.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain Pontiac | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 724742..735449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9P85_RS03395 (A9P85_03395) | - | 727617..728129 (-) | 513 | WP_014841116.1 | pilus assembly PilX family protein | - |
| A9P85_RS03400 (A9P85_03400) | - | 728126..729193 (-) | 1068 | WP_011945792.1 | PilW family protein | - |
| A9P85_RS03405 (A9P85_03405) | pilV | 729190..729729 (-) | 540 | WP_011945793.1 | type IV pilus modification protein PilV | - |
| A9P85_RS03410 (A9P85_03410) | fimT | 729742..730449 (-) | 708 | WP_014841117.1 | GspH/FimT family pseudopilin | Machinery gene |
| A9P85_RS03415 (A9P85_03415) | - | 730670..731530 (-) | 861 | WP_011945795.1 | polysaccharide deacetylase family protein | - |
| A9P85_RS03420 (A9P85_03420) | - | 731706..733055 (-) | 1350 | WP_072368662.1 | lpg0634 family Dot/Icm T4SS effector | - |
| A9P85_RS03425 (A9P85_03425) | - | 733345..734826 (+) | 1482 | WP_014841119.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24791.47 Da Isoelectric Point: 7.5607
>NTDB_id=185474 A9P85_RS03410 WP_014841117.1 729742..730449(-) (fimT) [Legionella pneumophila strain Pontiac]
MNKVITESQKFTLRNVANMLLCVDASVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
MNKVITESQKFTLRNVANMLLCVDASVLPAQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=185474 A9P85_RS03410 WP_014841117.1 729742..730449(-) (fimT) [Legionella pneumophila strain Pontiac]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
97.021 |
100 |
0.97 |