Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSK2_RS17575 Genome accession   NZ_CP020367
Coordinates   3417150..3417863 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3412150..3422863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS17555 (BSK2_17555) ghrB 3412294..3413271 (+) 978 WP_074794322.1 D-glycerate dehydrogenase -
  BSK2_RS17560 (BSK2_17560) psdB 3413309..3415249 (-) 1941 WP_080529832.1 lantibiotic ABC transporter permease PsdB -
  BSK2_RS17565 (BSK2_17565) psdA 3415224..3416003 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BSK2_RS17570 (BSK2_17570) psdS 3416086..3417156 (-) 1071 WP_080529833.1 two-component sensor histidine kinase PsdS -
  BSK2_RS17575 (BSK2_17575) braR 3417150..3417863 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  BSK2_RS17580 (BSK2_17580) - 3418010..3418219 (+) 210 WP_017695274.1 hypothetical protein -
  BSK2_RS17585 (BSK2_17585) yvcN 3418255..3419019 (-) 765 WP_080529834.1 arylamine N-acetyltransferase -
  BSK2_RS17590 (BSK2_17590) crh 3419020..3419277 (-) 258 WP_077671033.1 HPr family phosphocarrier protein -
  BSK2_RS17595 (BSK2_17595) whiA 3419301..3420251 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  BSK2_RS17600 (BSK2_17600) mgfK 3420274..3421227 (-) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  BSK2_RS17605 (BSK2_17605) rapZ 3421229..3422116 (-) 888 WP_003243903.1 RNase adapter RapZ -
  BSK2_RS17610 (BSK2_17610) rppI 3422141..3422617 (-) 477 WP_080478281.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=185407 BSK2_RS17575 WP_015384738.1 3417150..3417863(-) (braR) [Bacillus subtilis strain GQJK2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=185407 BSK2_RS17575 WP_015384738.1 3417150..3417863(-) (braR) [Bacillus subtilis strain GQJK2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment