Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   A9C19_RS03380 Genome accession   NZ_CP016020
Coordinates   713630..714271 (+) Length   213 a.a.
NCBI ID   WP_072578653.1    Uniprot ID   A0A1L3MND6
Organism   Bacillus weihaiensis strain Alg07     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 708630..719271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS03355 (A9C19_03255) - 709272..709502 (+) 231 WP_072578649.1 hypothetical protein -
  A9C19_RS03360 (A9C19_03260) - 709876..710016 (+) 141 WP_072578650.1 DegQ family regulator -
  A9C19_RS03365 (A9C19_03265) - 710163..711053 (+) 891 WP_083584270.1 polyprenyl synthetase family protein -
  A9C19_RS03370 comX 711076..711234 (+) 159 WP_072578651.1 competence pheromone ComX -
  A9C19_RS03375 (A9C19_03270) comP 711257..713554 (+) 2298 WP_072578652.1 histidine kinase Regulator
  A9C19_RS03380 (A9C19_03275) comA 713630..714271 (+) 642 WP_072578653.1 response regulator transcription factor Regulator
  A9C19_RS03385 (A9C19_03280) - 714498..714890 (+) 393 WP_072578654.1 hotdog fold thioesterase -
  A9C19_RS03390 (A9C19_03285) - 715452..716027 (+) 576 WP_072578655.1 chromate transporter -
  A9C19_RS03395 (A9C19_03290) - 716024..716554 (+) 531 WP_072578656.1 chromate transporter -
  A9C19_RS03400 (A9C19_03295) mnhG 716764..717123 (-) 360 WP_072578657.1 monovalent cation/H(+) antiporter subunit G -
  A9C19_RS03405 (A9C19_03300) - 717107..717391 (-) 285 WP_072578658.1 Na(+)/H(+) antiporter subunit F1 -
  A9C19_RS03410 (A9C19_03305) - 717391..717867 (-) 477 WP_072578659.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24196.77 Da        Isoelectric Point: 4.6532

>NTDB_id=185293 A9C19_RS03380 WP_072578653.1 713630..714271(+) (comA) [Bacillus weihaiensis strain Alg07]
MLYILVIDDHPAVREGTKAILEAEEGVKVDCLAPPYTIEVLKKIDFSQYDVLLMDLNLGDVNGMDLSVEILRLSTKSKII
LYTGYDVEDYFEEALQIGIYGAVSKTESKDKLLDYIRHAIEGEIVLSYDYFKKVLTQNEIHTKKKETHEYIFSDREVAIL
QEVEKGLTNQEIADSLHLSKRTIEYSLTAIFNKLNVSSRTEAVLIAKSKGLLD

Nucleotide


Download         Length: 642 bp        

>NTDB_id=185293 A9C19_RS03380 WP_072578653.1 713630..714271(+) (comA) [Bacillus weihaiensis strain Alg07]
ATGTTGTATATATTGGTAATTGATGACCATCCAGCTGTTAGAGAAGGAACCAAAGCGATATTAGAAGCAGAAGAGGGTGT
GAAGGTAGATTGCTTGGCTCCACCTTATACGATTGAGGTGCTTAAAAAGATCGATTTTTCACAATACGATGTCTTATTAA
TGGATTTAAATCTTGGCGATGTCAACGGGATGGATTTGTCAGTAGAGATTTTACGTCTTTCTACCAAGTCAAAGATTATT
CTTTACACGGGCTATGATGTTGAGGATTATTTTGAAGAGGCGTTACAAATAGGCATATATGGTGCTGTTAGTAAAACAGA
GTCGAAGGACAAGCTTTTAGATTATATTCGTCATGCGATTGAAGGAGAAATTGTCCTTTCTTATGATTATTTCAAAAAGG
TGTTAACGCAAAATGAAATTCATACGAAAAAGAAAGAAACGCATGAATATATATTTAGTGATAGAGAAGTGGCCATACTT
CAAGAGGTTGAGAAAGGTTTAACCAATCAGGAAATAGCGGACTCTCTTCACTTAAGTAAGCGGACCATAGAATATAGTTT
AACAGCAATATTTAATAAGCTTAACGTAAGTAGTAGGACAGAAGCCGTATTGATTGCTAAATCAAAAGGGCTTTTAGATT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L3MND6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

60.748

100

0.61

Multiple sequence alignment