Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | A9Y61_RS00265 | Genome accession | NZ_CP016017 |
| Coordinates | 51685..54813 (-) | Length | 1042 a.a. |
| NCBI ID | WP_064668787.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 34769 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 38408..56236 | 51685..54813 | within | 0 |
Gene organization within MGE regions
Location: 38408..56236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9Y61_RS00205 (A9Y61_00205) | orn | 38787..39350 (-) | 564 | WP_003687260.1 | oligoribonuclease | - |
| A9Y61_RS00210 (A9Y61_00210) | prmA | 39368..40255 (-) | 888 | WP_003692488.1 | 50S ribosomal protein L11 methyltransferase | - |
| A9Y61_RS00215 (A9Y61_00215) | accC | 40359..41720 (-) | 1362 | WP_003687264.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| A9Y61_RS00220 (A9Y61_00220) | accB | 41834..42295 (-) | 462 | WP_003687267.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| A9Y61_RS00225 (A9Y61_00225) | - | 42277..42534 (-) | 258 | WP_003687268.1 | hypothetical protein | - |
| A9Y61_RS00230 (A9Y61_00230) | queA | 42651..43691 (+) | 1041 | WP_010950980.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| A9Y61_RS00235 (A9Y61_00235) | carB | 43892..47107 (-) | 3216 | WP_047920561.1 | carbamoyl-phosphate synthase large subunit | - |
| A9Y61_RS00240 (A9Y61_00240) | - | 47118..47651 (-) | 534 | WP_003692498.1 | hypothetical protein | - |
| A9Y61_RS00245 (A9Y61_00245) | - | 48372..48761 (-) | 390 | WP_003687278.1 | endonuclease domain-containing protein | - |
| A9Y61_RS00250 (A9Y61_00250) | - | 48923..49302 (-) | 380 | Protein_48 | VOC family protein | - |
| A9Y61_RS00255 (A9Y61_00255) | carA | 49356..50489 (-) | 1134 | WP_047920606.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | - |
| A9Y61_RS00265 (A9Y61_00265) | pilC | 51685..54813 (-) | 3129 | WP_064668787.1 | PilC family type IV pilus tip adhesin | Machinery gene |
Sequence
Protein
Download Length: 1042 a.a. Molecular weight: 114200.63 Da Isoelectric Point: 9.8844
>NTDB_id=185206 A9Y61_RS00265 WP_064668787.1 51685..54813(-) (pilC) [Neisseria gonorrhoeae strain 34769]
MNKTLKRRVFRHTALYAAILMFSHTGGGGGQAQAREYAIIMNERKQPEVKWKGQYNQSTLKGKGRERKFIYNRSRRGGGS
VSFNNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRPGLAGYVYTGVHCGSYQCPKLTYKTRF
SFENTGLAKNANRLDKHPDPSRENSPIYKLKDYPWLGVSFNLGAEGTAKDGKVTNKLVSSFDENNSNNNLVYTTEGHPIS
LGDWQRESTAMAYYLNAKLHLLDKKRIEDITGKTVQLGTLKPGIDVKSANTGLGGILSFHAQWDIKDTGQIPVKLGLPEV
KARRCINKPNPNPKSKVPSPALTAPALWFAVQNGKVQMYSASVSTYPGSSSSRIFLQELKTRTDPARPGRHSLAALNERD
IKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGFNGNDGKNDTFGIYKDRLVTPETNEWSEVLLPWTARYYGNDDIFKT
FNQPNNKKQSDKKQYSQRYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATAANDGMVHIFKKTGTDERGYELKLSYIPG
TMPRKDIESNGSTLAQELRAFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGAMGFGGRGAYALDLSKIDGNYPAA
AALFDVKNGDNNGKNRVEVELGYTVGTPQIGKIRNGTYSAFLASGYAAKEIDDPTNKTALYVYDLKNTLGTPIRKIDVKD
GKGGLSSPTLVDKDLDGIVDIAYAGDRGGKMYRFDLSNSDPNKWSAKAIFEGTKPITSAPAVSRLADKRVVIFGTGSDLS
EDDVLNTDEQYIYGIFDDDEGTVKVTVQNGTGGGLLEQTLTKENNTLFLSNNKASGGSADKGWVVKLKEGERVTVKPIVV
LRTAFVTIRSYTGADKCGAETAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTSKGKSIPIGCMEKGGKTVCPNG
YVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREV
FF
MNKTLKRRVFRHTALYAAILMFSHTGGGGGQAQAREYAIIMNERKQPEVKWKGQYNQSTLKGKGRERKFIYNRSRRGGGS
VSFNNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRPGLAGYVYTGVHCGSYQCPKLTYKTRF
SFENTGLAKNANRLDKHPDPSRENSPIYKLKDYPWLGVSFNLGAEGTAKDGKVTNKLVSSFDENNSNNNLVYTTEGHPIS
LGDWQRESTAMAYYLNAKLHLLDKKRIEDITGKTVQLGTLKPGIDVKSANTGLGGILSFHAQWDIKDTGQIPVKLGLPEV
KARRCINKPNPNPKSKVPSPALTAPALWFAVQNGKVQMYSASVSTYPGSSSSRIFLQELKTRTDPARPGRHSLAALNERD
IKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGFNGNDGKNDTFGIYKDRLVTPETNEWSEVLLPWTARYYGNDDIFKT
FNQPNNKKQSDKKQYSQRYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATAANDGMVHIFKKTGTDERGYELKLSYIPG
TMPRKDIESNGSTLAQELRAFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGAMGFGGRGAYALDLSKIDGNYPAA
AALFDVKNGDNNGKNRVEVELGYTVGTPQIGKIRNGTYSAFLASGYAAKEIDDPTNKTALYVYDLKNTLGTPIRKIDVKD
GKGGLSSPTLVDKDLDGIVDIAYAGDRGGKMYRFDLSNSDPNKWSAKAIFEGTKPITSAPAVSRLADKRVVIFGTGSDLS
EDDVLNTDEQYIYGIFDDDEGTVKVTVQNGTGGGLLEQTLTKENNTLFLSNNKASGGSADKGWVVKLKEGERVTVKPIVV
LRTAFVTIRSYTGADKCGAETAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTSKGKSIPIGCMEKGGKTVCPNG
YVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREV
FF
Nucleotide
Download Length: 3129 bp
>NTDB_id=185206 A9Y61_RS00265 WP_064668787.1 51685..54813(-) (pilC) [Neisseria gonorrhoeae strain 34769]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAAGCCCGTGAATACGCTATTATCATGAACGAGCGAAAGCAGCCCGAGGTAAAGTGGAAGGGTC
AATATAATCAATCAACATTAAAGGGCAAAGGCAGGGAACGCAAATTTATCTATAATAGAAGCAGACGGGGTGGAGGCTCT
GTCTCATTCAACAATAGCGATGAGCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATTGGATTCATACCACCCGGC
CCGGGCTGGCAGGCTACGTCTACACCGGTGTCCATTGCGGAAGCTACCAATGCCCCAAACTTACCTATAAAACCCGATTT
TCCTTCGAAAATACCGGTTTGGCAAAAAATGCAAACAGGCTGGATAAACACCCGGACCCAAGCCGCGAAAATTCGCCCAT
TTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGGTAA
CCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAACAACCTCGTCTATACCACGGAAGGCCACCCTATTTCC
CTTGGCGACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAGGAT
TGAAGATATCACCGGCAAAACAGTGCAGTTGGGCACCTTGAAACCGGGCATCGATGTGAAGTCGGCAAATACGGGGCTGG
GGGGCATACTATCTTTTCATGCTCAGTGGGACATTAAAGATACCGGGCAGATCCCGGTCAAGCTCGGTCTGCCGGAAGTC
AAGGCCAGGCGCTGCATCAATAAACCGAACCCCAATCCCAAATCCAAAGTCCCTTCGCCGGCACTGACCGCCCCCGCGCT
GTGGTTCGCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGCTCGAGCAGCCGCA
TCTTCCTCCAAGAGCTGAAAACTCGAACCGACCCCGCCCGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATGAACGAGAT
ATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGCCCCGGG
CAATAGCGGCCGGGTCGCGGGTTTTAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGCTCGTCA
CACCTGAGACCAACGAGTGGAGCGAAGTGCTGCTGCCTTGGACGGCTCGGTATTACGGTAATGACGATATATTTAAAACA
TTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAGATACCGCATCCGCACAAAAGAAGATGA
CAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATTTGGCAACCGCCGCGA
ACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACGGATGAACGAGGCTACGAACTGAAGCTCAGCTACATCCCCGGC
ACGATGCCGCGCAAGGATATTGAAAGCAACGGTTCTACACTCGCCCAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAAGACAAGCAAAAACATTTCTTTA
TGTTTGGTGCGATGGGTTTTGGCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCGACGGAAATTATCCGGCCGCC
GCCGCCCTGTTTGATGTCAAAAATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCAC
GCCGCAAATCGGCAAAATCCGCAACGGCACATACTCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGAAATTGACGACC
CAACAAATAAAACCGCGCTGTATGTATATGATTTGAAAAACACCTTAGGTACGCCGATTAGAAAAATCGATGTGAAGGAC
GGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCG
GGGCGGGAAGATGTACCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGCAAAGGCTATTTTCGAAGGCACAA
AACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTATCTTCGGCACGGGCAGCGATTTGAGT
GAAGATGATGTACTGAATACGGACGAACAATATATTTACGGTATCTTTGACGACGATGAGGGGACGGTTAAGGTAACGGT
ACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAACGCTTACGAAGGAAAATAACACCTTGTTCCTGAGCAATAATAAGG
CATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGAAGGAAGGAGAACGCGTTACCGTCAAACCGATCGTGGTA
TTGCGTACCGCCTTTGTCACCATCCGCAGCTATACGGGCGCGGACAAATGTGGCGCGGAAACCGCCATTTTGGGCATCAA
TACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCG
GCCATAAGAAAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGA
TATGTTTACGACAAACCGGTTAATGTGCGCTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGA
TGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCA
CCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTC
TTCTTCTGA
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGCAGGCGCAAGCCCGTGAATACGCTATTATCATGAACGAGCGAAAGCAGCCCGAGGTAAAGTGGAAGGGTC
AATATAATCAATCAACATTAAAGGGCAAAGGCAGGGAACGCAAATTTATCTATAATAGAAGCAGACGGGGTGGAGGCTCT
GTCTCATTCAACAATAGCGATGAGCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGCTTTGATACCGCCGAGCTGAACAAGCGCGGCAATGCCGTCAATTGGATTCATACCACCCGGC
CCGGGCTGGCAGGCTACGTCTACACCGGTGTCCATTGCGGAAGCTACCAATGCCCCAAACTTACCTATAAAACCCGATTT
TCCTTCGAAAATACCGGTTTGGCAAAAAATGCAAACAGGCTGGATAAACACCCGGACCCAAGCCGCGAAAATTCGCCCAT
TTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGGTAA
CCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAACAACCTCGTCTATACCACGGAAGGCCACCCTATTTCC
CTTGGCGACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAGGAT
TGAAGATATCACCGGCAAAACAGTGCAGTTGGGCACCTTGAAACCGGGCATCGATGTGAAGTCGGCAAATACGGGGCTGG
GGGGCATACTATCTTTTCATGCTCAGTGGGACATTAAAGATACCGGGCAGATCCCGGTCAAGCTCGGTCTGCCGGAAGTC
AAGGCCAGGCGCTGCATCAATAAACCGAACCCCAATCCCAAATCCAAAGTCCCTTCGCCGGCACTGACCGCCCCCGCGCT
GTGGTTCGCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGCTCGAGCAGCCGCA
TCTTCCTCCAAGAGCTGAAAACTCGAACCGACCCCGCCCGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATGAACGAGAT
ATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGCCCCGGG
CAATAGCGGCCGGGTCGCGGGTTTTAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGCTCGTCA
CACCTGAGACCAACGAGTGGAGCGAAGTGCTGCTGCCTTGGACGGCTCGGTATTACGGTAATGACGATATATTTAAAACA
TTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAGATACCGCATCCGCACAAAAGAAGATGA
CAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATTTGGCAACCGCCGCGA
ACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACGGATGAACGAGGCTACGAACTGAAGCTCAGCTACATCCCCGGC
ACGATGCCGCGCAAGGATATTGAAAGCAACGGTTCTACACTCGCCCAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAAGACAAGCAAAAACATTTCTTTA
TGTTTGGTGCGATGGGTTTTGGCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCGACGGAAATTATCCGGCCGCC
GCCGCCCTGTTTGATGTCAAAAATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCAC
GCCGCAAATCGGCAAAATCCGCAACGGCACATACTCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGAAATTGACGACC
CAACAAATAAAACCGCGCTGTATGTATATGATTTGAAAAACACCTTAGGTACGCCGATTAGAAAAATCGATGTGAAGGAC
GGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCG
GGGCGGGAAGATGTACCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGCAAAGGCTATTTTCGAAGGCACAA
AACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTATCTTCGGCACGGGCAGCGATTTGAGT
GAAGATGATGTACTGAATACGGACGAACAATATATTTACGGTATCTTTGACGACGATGAGGGGACGGTTAAGGTAACGGT
ACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAACGCTTACGAAGGAAAATAACACCTTGTTCCTGAGCAATAATAAGG
CATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGAAGGAAGGAGAACGCGTTACCGTCAAACCGATCGTGGTA
TTGCGTACCGCCTTTGTCACCATCCGCAGCTATACGGGCGCGGACAAATGTGGCGCGGAAACCGCCATTTTGGGCATCAA
TACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCG
GCCATAAGAAAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGA
TATGTTTACGACAAACCGGTTAATGTGCGCTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGA
TGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCA
CCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTC
TTCTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Neisseria meningitidis A1493 |
70.857 |
100 |
0.714 |