Detailed information NTG0185155

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AM483_RS23030
• Genome accession: NZ_CP020116
• Coordinates: 4436467..4437492 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain AR_0104
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4431467..4442492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM483_RS23010 (AM483_23350)	metJ	4432652..4432969 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AM483_RS23015 (AM483_23355)	yiiX	4433029..4433637 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
AM483_RS23020 (AM483_23360)	rpmE	4433698..4433910 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AM483_RS23025 (AM483_23365)	priA	4434113..4436311 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
AM483_RS23030 (AM483_23370)	cytR	4436467..4437492 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
AM483_RS23035 (AM483_23375)	ftsN	4437584..4438543 (+)	960	WP_000068834.1	cell division protein FtsN	-
AM483_RS23040 (AM483_23380)	hslV	4438636..4439166 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AM483_RS23045 (AM483_23385)	hslU	4439176..4440507 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AM483_RS23050 (AM483_23390)	menA	4440574..4441500 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AM483_RS23055 (AM483_23395)	rraA	4441593..4442078 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AM483_RS23060 (AM483_23400)	zapB	4442163..4442408 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=185155 AM483_RS23030 WP_000644908.1 4436467..4437492(+) (cytR) [Escherichia coli strain AR_0104]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=185155 AM483_RS23030 WP_000644908.1 4436467..4437492(+) (cytR) [Escherichia coli strain AR_0104]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625